Oxynema acuminatum: Oscil6304_0934
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Entry
Oscil6304_0934 CDS
T02368
Name
(GenBank) type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
oac
Oxynema acuminatum
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oac03032
]
Oscil6304_0934
03400 DNA repair and recombination proteins [BR:
oac03400
]
Oscil6304_0934
Enzymes [BR:
oac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Oscil6304_0934
DNA replication proteins [BR:
oac03032
]
Prokaryotic type
DNA Topoisomerases
Oscil6304_0934
DNA repair and recombination proteins [BR:
oac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Oscil6304_0934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Intein_splicing
Toprim
LAGLIDADG_3
HTH_3
HATPase_c_3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AFY80666
UniProt:
K9TEV4
LinkDB
All DBs
Position
1138010..1141603
Genome browser
AA seq
1197 aa
AA seq
DB search
MTSNYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEI
EFNPDGSCTVTDDGRGIPTDIHSKTGRSALETVMTVLHAGGKFGGGGYKVSGGLHGVGIS
VVNALSEWVEVTVWREKKVHTQRYERGAAIGELTGKPIKENRTGTSVCFKPDLQIFSTGI
EFDYSTVAGRLRELAYLNAGVKITFSDNRIELLKNNEPRVESYCYEGGIREYVEYMNRDK
QPLHEEIIYVEGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRT
MNAIARKRNKLKEGDSNLGGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSL
VGEVLTEYLEFRPSVADAILERAIQAFNAAEAARRARELVRRKSVLESSPLPGKLADCST
KDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNTEIQALIA
ALGLGIKGEEFDSTQLRYHRIIIMSVAGDEPTLVMDDKGQTEFVKIGQFIDECVEGRRSP
ERYRVVSFDPVTHATRFKPLKAVIRHGHEEAMYKLTTRYNRSVKVTSSHSVFVYENGEVI
LKKGNEVKSGDLLVASRRLPRPAESPTRIDLLDTLYRAGLTRSLYLKGEDVRRIASQRLL
AKVATPGEWNEPRVELAATAWQQLISQRKMAGISQKQVATVCGVKQPITISHWERGINRP
TLPNFLEYLEAIGGNENIVYETVPSKLDRLLEQDDTSKNALWREVSAYKAFEYFTPSELI
QLGDEVQIVPQAHQDKAFNRYLPITKELMNFLGWYVAEGTLSKHQVSLNLGKKDERFIPA
LSEAIAATFGETPRRYNDPDSDGIKLYFHSVAAARLLQAWGLAKPAHEKQLPDLVFSLPE
DLQLAFLEGYFLGDGTIGSNNFSWTTNSPALKEGLLYLFGQLGLIATPTEHQPATPADAP
IQTRHAYYTLTICGKEQIAFCQAIWQHHANASQLEDHLARPTRKSQDFVPISDDLMGLKV
ISAEEIDLVGDYVYDFSVEGDENFVCGTGGLCAHNTDADVDGAHIRTLLLTFFYRYQREM
VDQGYVYIACPPLYKVERGRNHFYCYSDRELQNLIRNEFPSNANYTIQRFKGLGEMMPTQ
LWETTMNPESRTLKRVEIEDAAEADRVFTVLMGDRVAPRREFIETYGPQLKLMDLDI
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaactacagcgctgaccaaatacaagttcttgaaggactcgaagcagtacgc
aagcgaccggggatgtacatcgggaccaccggaccccgaggactccaccatctagtttac
gaggttgtggacaactcgatcgatgaggcgcttgctggacactgtacccatattgaaatt
gagttcaatccagatggctcttgtaccgtaaccgacgacggtcgcggcattcctacggac
atccattctaaaacaggaaggtccgccctggaaaccgtgatgacggtcctccacgccgga
ggtaaatttggaggaggcggttataaagtctctggaggattacacggggtgggtatctcc
gtggttaatgctttatccgaatgggttgaagtcaccgtttggcgagagaaaaaagtccat
acccaacggtatgaacggggtgcagcaattggagaactgacaggcaaaccgattaaagaa
aatcgcaccggaacctccgtttgctttaaaccggacctgcaaattttcagtaccggcatt
gaatttgattacagcaccgtagcgggccgattacgcgaactggcctacctaaatgctggg
gttaaaatcaccttttccgataatcggattgaactgctcaaaaataatgagcccagagtt
gaaagctattgctatgaagggggaattcgggaatatgtagaatacatgaaccgagacaaa
cagccccttcatgaagaaattatttacgtcgaaggcgaacggaataatgttcaggtggaa
gtctcgttgcaatggtgtactgatgcttacaccgataatgttttgggatttgctaacaac
atccggaccattgatgggggaacccacctagaaggattgaaagcagttctgacccggacc
atgaatgcgatcgcccgcaaacggaataaactcaaagaaggggattccaatcttggcggt
gagcacgttcgggaagggttaacggcagtgatttccgtgaaagtgcctgacccggaattt
gaagggcaaactaaaaccaaattaggtaataccgaagtccggggaattgtggattcttta
gtgggtgaagtgctcacggagtatttagaatttcgccccagtgtggcggatgcgatttta
gaacgcgcaattcaggcatttaatgccgcagaagctgcccgacgcgccagggaattggtg
cgccggaaatccgtcttagaatcgtctcccctgcctggaaaactggcggattgtagtacc
aaagaccccagtgaaagtgaaatctacattgtagaaggggatagtgcgggaggcagtgcc
aaacaaggacgcgatcgccgtttccaagccatcctccccttacgcgggaaaatcctgaac
atcgaaaaaaccgatgattccaagatttacaagaataccgaaatccaagccttaattgcc
gccctcggtttagggattaaaggggaagagtttgactccacccaactgcggtatcatcga
atcatcatcatgagcgtagcgggagacgaacccaccctggtcatggatgacaaagggcaa
acggagttcgtcaaaattggtcaatttatcgacgagtgcgtagaagggcgtcgcagtccc
gaacgctatcgcgtggtttccttcgaccccgtgacccatgccacccgctttaaacccttg
aaagcggtgattcgacatggccatgaagaagccatgtataaactcaccacccggtataat
cgctcagtcaaagtcacctcctctcatagcgtcttcgtctatgaaaacggggaagtgatt
ctcaaaaaaggcaacgaagtcaaatcgggagatttattagtcgcctctcgacggttaccc
cgtccggcagaaagcccaactcgcattgatttgctagacaccttgtatcgcgctggactg
acgcgatcgctctacttaaaaggcgaagatgtgcgccggattgccagtcagcgtctgctg
gctaaagttgctaccccaggggaatggaacgaacctcgggtggaattggcagcgacggca
tggcaacaactgatttcccaacggaaaatggccggtatcagccagaaacaggtggcaacc
gtctgtggcgttaaacaaccgattacgatcagtcattgggaacgggggattaatcgtccc
acgttaccaaactttttggaatacctagaggcgatcggggggaacgagaatatcgtttat
gaaaccgtcccctcaaaactcgatcgcctgttagaacaggatgataccagcaaaaatgcc
ctgtggcgtgaagtcagtgcctacaaagcatttgagtatttcacccccagcgaactgatt
caactcggggacgaagtgcaaattgtcccccaggcgcatcaagataaagcctttaatcgc
tatttgccgattacaaaggaattgatgaatttcttgggatggtatgtcgccgagggaacc
ctaagtaaacaccaagttagcttaaatctgggtaaaaaagatgagcggtttatcccggca
ttgagtgaggcgatcgccgccaccttcggagaaacgccacggcgctataatgacccggac
agtgatggcattaaactctatttccatagtgtcgctgctgcccggttattacaagcctgg
ggtttagccaaacccgcccacgagaagcaactgcctgatttagttttcagtctcccagaa
gacctgcaattggcctttttggaaggctatttcctcggagatggcacaattggcagcaat
aacttctcctggacgacgaattcccccgccttgaaagaagggttactctatctgttcgga
caactggggttaattgccactcctaccgaacatcaacccgcaactccagcagatgcgccg
atccaaactcgccatgcctattacaccctgacaatttgtgggaaagagcaaattgccttc
tgtcaagcaatttggcaacatcacgccaatgcatcgcagttggaggaccatttagcccgt
cccactcgcaaatctcaggatttcgtcccgatcagcgatgatttaatgggactgaaagtg
atatcggctgaggagattgatttagtcggtgactatgtttatgacttctccgtagaaggg
gatgaaaacttcgtttgcggaactggcgggttatgtgctcataacaccgacgcggacgtt
gatggggcgcatattcggactctgctgctgaccttcttctatcgctatcaacgggaaatg
gtggatcaagggtatgtttatattgcttgtccgccgctatataaagtagaacggggacga
aaccatttctactgttacagcgatcgcgaactgcaaaacttgatccgcaatgagttcccc
tcgaatgcgaactacacgattcagcggtttaaagggttgggtgaaatgatgccaactcaa
ctctgggaaacgacgatgaatccagaaagtcgcaccctgaaacgagtggaaattgaggat
gcggcagaagccgatcgcgtgtttacggtgttaatgggcgatcgggtagcaccccgtcgt
gagttcatcgaaacctacggtcctcaactcaaactgatggatctggatatttaa
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