Oxynema acuminatum: Oscil6304_1212
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Entry
Oscil6304_1212 CDS
T02368
Name
(GenBank) RNA polymerase sigma factor, cyanobacterial RpoD-like family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
oac
Oxynema acuminatum
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oac03021
]
Oscil6304_1212
Transcription machinery [BR:
oac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Oscil6304_1212
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
MerR_1
Motif
Other DBs
NCBI-ProteinID:
AFY80928
UniProt:
K9TEU2
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All DBs
Position
1474134..1475090
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AA seq
318 aa
AA seq
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MKTAPTSTDLVRTYLREIGRVPLLTHEQEIVLGKQVQHLSLLHEMKETLTEQFGHEPTDV
EWSQAAGLSLVELQQAIEQGETAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKASRELSQ
QLGRTATIGELAVELELSPKQIREYMERARHPLSLDLRVGDNHDTELSELLEDTGPSPED
FATHSAMRADLEKLMSELTTQQREVIALRFGLEDGQAMTLSKIGDRLNISRERVRQIERE
ALTKLRKRKADMNEYVAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgctccaacttctacagacttagttcgcacttacctgcgagaaattggccga
gttcccctgctaactcatgagcaggagattgttttgggtaagcaggttcagcacttgagc
ctgttgcatgagatgaaagagaccctcaccgaacagttcggtcatgaaccgacggatgta
gaatggtctcaagcagcagggttgtccttagttgagttgcaacaggcgatcgagcaaggg
gaaaccgccaagcgcaagatggtggaagctaatttgcgactggtggtatctgttgccaaa
aaatatattaaacgcaatgtcgatttactcgacttaatccaagaagggaccatcggaatg
cagcgcggggtagagaaatttgaccctacgaaaggttatcgcttttcgacttatgcctat
tggtggatccgtcaagcgattactcgggcgatcgcagaaaagggccgcacaattcgtctt
ccgattcacattactgaaaaacttaacaaaatcaagaaagcctctcgggaattatcccag
caactgggacgcactgccaccattggcgagttggcggtagaattagaactttctccgaag
caaattcgcgagtatatggaacgcgccagacatcccctctccctggatttacgggtgggg
gataatcatgatacagaactgagtgagttgttggaagataccggaccctctccggaagat
tttgccactcattcggcgatgcgagcagatttagaaaaattgatgtcggagttaaccact
cagcagcgtgaggtgattgccttacggtttgggttggaagatggacaggcgatgaccctt
tctaagataggcgatcggctcaatattagtcgtgagcgtgtccgccaaatcgaacgagaa
gctctcactaaactccgcaagcgcaaagcagatatgaatgaatatgttgccagctaa
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