Oxynema acuminatum: Oscil6304_2309
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Entry
Oscil6304_2309 CDS
T02368
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
oac
Oxynema acuminatum
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oac03032
]
Oscil6304_2309
03036 Chromosome and associated proteins [BR:
oac03036
]
Oscil6304_2309
03400 DNA repair and recombination proteins [BR:
oac03400
]
Oscil6304_2309
DNA replication proteins [BR:
oac03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Oscil6304_2309
Chromosome and associated proteins [BR:
oac03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Oscil6304_2309
DNA repair and recombination proteins [BR:
oac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Oscil6304_2309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFY81941
UniProt:
K9TIG5
LinkDB
All DBs
Position
2800548..2800826
Genome browser
AA seq
92 aa
AA seq
DB search
MNKGELVDVVAEKANVTKKQADAVLTAALDAVIEAVSSGDKVTLVGFGSFEARERKAREG
RNPKTGDKMEIPATKVPAFSAGKFFKEKVAPK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtgaactcgtcgatgttgtagctgagaaggctaacgtcaccaaaaaacaa
gcggatgcggtgctgactgcggccctcgatgccgttatcgaagcggtctcttctggggat
aaagtgaccctggtgggatttggttcgtttgaagctcgtgagcgcaaggcgcgtgaaggt
cgcaaccccaaaaccggcgacaaaatggaaattccggcaaccaaggtccctgccttctct
gctggtaagttctttaaagaaaaagtcgctcctaagtaa
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