Oxynema acuminatum: Oscil6304_2747
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Entry
Oscil6304_2747 CDS
T02368
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oac
Oxynema acuminatum
Pathway
oac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Oscil6304_2747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oac03021
]
Oscil6304_2747
03400 DNA repair and recombination proteins [BR:
oac03400
]
Oscil6304_2747
Enzymes [BR:
oac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Oscil6304_2747
Transcription machinery [BR:
oac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Oscil6304_2747
DNA repair and recombination proteins [BR:
oac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Oscil6304_2747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
YgaB
Motif
Other DBs
NCBI-ProteinID:
AFY82354
UniProt:
K9TK24
LinkDB
All DBs
Position
3402518..3403468
Genome browser
AA seq
316 aa
AA seq
DB search
MAQFQIECVESNTERDQSQYGKFLLEPLERGQGTTVGNALRRVLLSNLEGTAVSAVRIAG
VNHEFATIEGVREDVLEILLNMKEVVLKSYSPQPQIGRLMVQGPATVTAGRFDLPSEVES
IDPNQYIATVAEGSTLEMEFRVEKGKGYRAVDRSRDENAALDFLLIDAVFMPVRKVNYSV
EDARVGGSLEKDRLIMEIWTNGSISPQEALSQSASILVDLFSPLKDITIESMLEESPTEA
DPTSQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGQKSAEEVIEALQK
RLGITLPQEKAAKSST
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcagattgagtgtgtagagtcaaacactgaaagagaccagtcccagtat
ggaaaattcttactggaaccgttagaacggggtcaaggcacgacggtgggtaatgccctc
cgcagagtgctactttctaacttggaagggacagcggtcagcgctgtccgaattgccggt
gtcaatcacgagtttgccacaattgagggcgttcgagaagatgttctggaaattttactg
aacatgaaggaagtcgtcctcaaaagctactcaccgcaaccgcaaattggacgcttaatg
gttcaaggtccggcaacggtaacggcaggtcggtttgatttaccctcagaggtcgagtcg
attgatcccaaccagtatatcgccaccgttgccgagggttccaccttagaaatggaattt
cgggtggaaaagggcaaaggatatcgagcagtggaccggagtcgagatgaaaatgcggct
ttagactttctcttgatagacgctgtattcatgcccgttcgcaaggtcaactacagcgtt
gaagatgcacgggtaggcggctctttggagaaagaccgattgattatggaaatctggacg
aatggctcaatttcgccccaagaggcgttgagtcaatcggccagcatcctagtggatctg
ttttctccactcaaagatatcacgatcgagtcaatgctcgaagaatcgccgactgaagcc
gacccgaccagtcaaattccgattgaagaattgcaactttccgtgcgagcttacaactgt
ctcaaacgggcgcaaattaattcagtcgcagatctactcgactacagtcaagaagatctt
ttagaaatcaaaaacttcggtcaaaagtcggcagaagaagtcatcgaagcattgcaaaag
cgcttagggattaccttgccccaagaaaaggcagctaaaagcagcacttaa
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