Oxynema acuminatum: Oscil6304_3311
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Entry
Oscil6304_3311 CDS
T02368
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oac
Oxynema acuminatum
Pathway
oac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Oscil6304_3311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oac03019
]
Oscil6304_3311
03110 Chaperones and folding catalysts [BR:
oac03110
]
Oscil6304_3311
03029 Mitochondrial biogenesis [BR:
oac03029
]
Oscil6304_3311
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oac04147
]
Oscil6304_3311
Enzymes [BR:
oac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Oscil6304_3311
Messenger RNA biogenesis [BR:
oac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Oscil6304_3311
Chaperones and folding catalysts [BR:
oac03110
]
Heat shock proteins
HSP60 / Chaperonin
Oscil6304_3311
Mitochondrial biogenesis [BR:
oac03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Oscil6304_3311
Exosome [BR:
oac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Oscil6304_3311
Exosomal proteins of other body fluids (saliva and urine)
Oscil6304_3311
Exosomal proteins of breast cancer cells
Oscil6304_3311
Exosomal proteins of colorectal cancer cells
Oscil6304_3311
Exosomal proteins of bladder cancer cells
Oscil6304_3311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFY82885
UniProt:
K9TK22
LinkDB
All DBs
Position
complement(4121013..4122701)
Genome browser
AA seq
562 aa
AA seq
DB search
MAKIISFNEESRRALERGVNALADAVRITMGPKGRNVVLEKKYGAPDIVNDGITIAKEIE
LEDPLENTGAKLVREVAAKTKDIAGDGTTTATVLAQAMIREGLKVVTAGANPVSVRRGIE
KTVAYLLEEIQALAKPVEGDAIAQVATVSAGNDEEIGQMIAEAMDKVTKDGVITVEESKS
LTTELEVVEGMQLDRGYISPYFVTDNERMIVEFENPAILITDKKISSIQDLVPILEKVAR
ASKPLLIISEDVDGEALATLVVNKARGVLNVAAIKSPGFGERRKAMLQDIAVLTNGQMIS
EEIGLSLDTATLDMLGTARKVTITKETTTIVADADDKNKEAIQIRIGQIRKELDRSDSDY
DKEKLQERIAKLAGGVAVIKVGAPTETELKERKLRIEDSLNATKAAVDEGIVPGGGTTLI
HLVSKIDSLKASLNDEEILGADIVAKALEAPVRQIADNAGVEGSVVVEKVRESAFNVGYN
ALTGEYVDMIAAGIIDPAKVVRSALQNAASIASMVLTTEALVVEQPEPAGAMPDMGGMGG
MGGMGGMGGMGGMGGMGGMGMM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattatttcctttaacgaagaatcccgtcgggcgctagaacgcggggtcaac
gccctcgccgatgcagtccgaatcaccatgggaccgaaaggacgcaacgtggtgctagaa
aagaaatatggcgcacccgatatcgtaaatgatgggatcaccattgctaaagaaatcgaa
ttagaagaccccctggaaaacacgggggccaaactggtgcgggaagtcgccgccaaaacc
aaagatattgccggtgatggcacgactaccgccactgtcttagctcaggcgatgattcgc
gaaggattaaaagttgttactgccggtgcaaacccggtgtcagtccgccgtgggattgaa
aaaactgtcgcctacttgttagaagaaattcaagcgttggctaaacccgtggaaggggac
gcgatcgcccaagttgccacggtatccgctggcaatgatgaagaaatcggtcagatgatt
gccgaggcgatggataaagtcaccaaagatggcgtgatcaccgtcgaagaatccaagtcc
ctcaccacggaactggaagtcgtcgaagggatgcagctcgatcgcggctatatctccccc
tacttcgtcacagacaacgaacggatgattgtcgagtttgaaaacccggcaatcctgatt
actgacaaaaaaatcagttccattcaggacctcgtccccatcctggaaaaagtggcccgc
gccagcaaacccctcttaatcatctctgaagatgtcgatggcgaagccttggcaaccctg
gtggtcaataaagcccggggtgtcttaaatgtagccgctatcaaatcccccggatttggt
gaacgccgtaaagcgatgttgcaagatatcgctgtactcaccaatggtcagatgatttcc
gaggaaattggtctgagtctggataccgccaccctggatatgctgggaaccgcccgcaag
gtgaccattaccaaggaaaccaccaccattgtggcggatgccgatgacaaaaacaaagaa
gcgattcaaatccgcatcggtcaaattcgcaaagaattagacagaagcgattccgactac
gacaaagaaaaacttcaagaacggatcgccaaactcgccgggggtgtcgccgtaattaaa
gtgggcgctcctacggaaacggaactcaaagaacgcaaactgcggatcgaagactccctg
aatgctactaaagcagcagtggatgaaggcattgttcccggtggcggaacgaccctgatt
catctggtgagcaaaattgactccctcaaagccagtctcaatgatgaagaaatcctcggg
gctgatattgttgctaaagccttagaagcacctgtgcgtcaaattgcggataacgccggt
gttgaaggaagcgtggttgtggaaaaagtgcgggaaagtgcctttaatgtgggctacaac
gcgctaacgggtgagtatgtggatatgattgcggcggggattattgacccggctaaagtg
gtgcgatcggccttgcagaatgcggcttcgatcgccagcatggtcctaaccacggaagcc
ctcgttgttgagcagcctgaaccggctggtgccatgcctgacatgggcggcatgggcggc
atgggcggcatgggcggcatgggcggcatgggcggcatgggcggcatgggcggcatgggc
atgatgtaa
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