Oxynema acuminatum: Oscil6304_3481
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Entry
Oscil6304_3481 CDS
T02368
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
oac
Oxynema acuminatum
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oac03032
]
Oscil6304_3481
03036 Chromosome and associated proteins [BR:
oac03036
]
Oscil6304_3481
03400 DNA repair and recombination proteins [BR:
oac03400
]
Oscil6304_3481
DNA replication proteins [BR:
oac03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Oscil6304_3481
Chromosome and associated proteins [BR:
oac03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Oscil6304_3481
DNA repair and recombination proteins [BR:
oac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Oscil6304_3481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Sigma70_r2
HU-DNA_bdg
DUF3874
Motif
Other DBs
NCBI-ProteinID:
AFY83047
UniProt:
K9TJL5
LinkDB
All DBs
Position
complement(4349555..4349812)
Genome browser
AA seq
85 aa
AA seq
DB search
MSIDKTELIAKIAQRVQKQPEAVEEILDATLVEIYESLKQGQSVSLKNFGTFYIRPEGET
SVFKFNPSQRLRKLFGWASTYRGEL
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgacaaaacagaactgattgctaaaatagcccaacgggtccagaaacaaccc
gaggcagttgaggaaatattagacgcaaccttagtggaaatttacgaatccctcaaacaa
gggcaaagtgtttccctcaagaactttggcacgttttacattcgtccagaaggagaaacg
agcgttttcaaattcaacccgtctcaacgcttaagaaaactcttcggttgggcttcaact
tatcgcggagaactttaa
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