Oscillatoria acuminata: Oscil6304_4138
Help
Entry
Oscil6304_4138 CDS
T02368
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Organism
oac
Oscillatoria acuminata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
GAF
GAF_2
GAF_3
PAS
PAS_4
PAS_9
Autoind_bind
Motif
Other DBs
NCBI-ProteinID:
AFY83667
UniProt:
K9TLC3
LinkDB
All DBs
Position
complement(5264030..5267725)
Genome browser
AA seq
1231 aa
AA seq
DB search
MALGMLSIGAIISMVSIGFLYHHLNQDQRQQVILAAQTKSQALEPYFWQVRAIAEQVSRG
NTLEISSLSLGVDSTDGLPLSSPLRVDVLEQAPKIAGLTRIDRQGEVMVQLGMKIPQSLW
PKSGEDSPENISFQPVQVGNPSYLLVTVPRFNPPSPEPEEMDLFLFTVSDIERILQEFVA
TGQSLEIALARVNNARIDRLLPFLSYTDEQGLMPLGPNTRLLGLLHEKMTPQRGVRFQNS
PVPGLEAVAVAPIQNSNWVVLLQLSSTHVEAGIQQIQLLGAVTVVLLLLGSGLITLLLYP
LARPILIHADQLEQQLQANMASLERELQERKRTERLLAAHARESAVIAGLGQWALAGMEV
MSLIEAAAAEVIHTLDSDCCCLWELLPDCKALALKAGAGFCQERTKAETLEVNAESQVGY
TLLANEPILSPDFLEETRFTPSPFLLEQGIASGITVLVHGQREPYGVLAAYSTERHQFDL
EDLHFLQAIANVLAAAIDRQKRERALCESEERYALAVAGANDGLWDWNLITNRVYFSPRW
KSLLGYQVENGEKISEHNSVYRPEEWFSRVHPDDIDPLKQAIADHLAGVTPHFTSEHRIL
DVQGQYRWMLSRGLAVRDREGNPYRMAGSQTDISDRKATEEANIRLAAFPKYNPNPVLAC
DFQGEIVYVNPATERVLEELCLGLATGFLPMNHRELVVNSLNQGKSGWQVERFVQDRLFY
WLYHPIPSLNIVHIHVMDITDRQNAQDTLRHEALHDSLTGLPNRALFLNRLTSALTRAKI
QRDYQFAVIFLDLDRFKVVNDSLGHFIGDCLLVALAKRLQNCVGSGDILARFGGDEFTIL
VEHIPNIQSAIKVAKKIQTELISPFNLKGYEVFTSASMGIAPSTLSYEHPEDLLRDADIA
MYRAKARGKARYEVFDKKMLENAVAQLTLENDLRRSILKNGDFPLPTPVEKSPFIPKKIT
KPVPDWVIPDPAISEEKIHRQPNLERSEFLLHYQPIVALDTGLLSGFEALVRWQHPERGL
VFPGEFIPVAEETGLILSLGEWVLREACLQMQQWHEQFKTPELLSISVNLSGQQLGQPDL
LERIDRILAETHLNPSSLKLEITESVLMENAALAAELLEKLRSRNIHLCIDDFGTGYSSL
SHLAQFPINTLKIDKSFVMGMDGDNESSEIVRAIATLAHNLGMYVTAEGVEKEQHLVQLW
SLHCDYGQGYFFSRGLDRVAAQKLLEQSPRW
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggcattggggatgctctccatcggtgcaatcatttctatggtcagtatcggttttctt
tatcatcatctgaatcaggaccagagacaacaggtaattttagcggcccaaacgaaaagt
caagccctagagccgtatttctggcaggtgagggcgatcgctgaacaggtttcccgtggc
aacacccttgaaatatcgagtttatctctcggggtagattcaaccgatgggttgccgttg
agttcgcccttgagggtcgatgtcctcgaacaagccccaaaaatagcgggcctcactcgg
atcgatcgccagggtgaagtgatggtccagttaggaatgaagattcctcagtccttgtgg
ccaaaatcgggggaggattcccctgaaaacatctccttccagccggtgcaagtcggcaac
ccatcttatttgctcgtcacagttccccgatttaacccgccatccccagaacccgaggag
atggatttatttttattcaccgtctcggacatcgaaagaattttacaggagtttgtcgcc
acaggtcaatccttagaaattgccttagcccgagtcaataatgcgcggatcgatcgcctg
ctgccgtttctctcttatacggatgaacagggtttaatgcctctgggaccgaatactcgg
cttttgggattgctccatgagaaaatgactccccaacgtggtgtgcgattccagaacagc
cctgttcctggtttagaagcggtggcagttgcgccgattcagaacagcaactgggtggtg
ttgttgcaactttcctccactcatgttgaagcaggcattcagcagatccagcttttaggg
gcggtgacggttgtcttattgctcttagggagtggattaatcacgcttttgctatacccc
ctagctcgtccgattctgattcatgccgatcaattagaacaacaactgcaagcgaatatg
gcatcattggaacgggaactgcaagaacgaaagcgcaccgaacgactgttagctgcacac
gctcgggaaagtgcggtgattgctggattaggacagtgggcgctggctgggatggaggtg
atgagcctgattgaagcagcagcagccgaagtgatccataccctggatagcgattgttgt
tgcttgtgggaattgttacctgactgcaaggcattggcgttaaaagcgggtgcgggattt
tgtcaggagcggactaaggcggaaaccctggaggtgaatgcagaatcccaagtgggttat
accctattggcgaatgaaccgattttgtcccctgatttcctggaggaaacccggttcact
ccctccccctttttgttagaacaggggattgccagtgggattacagtgctggtacatgga
caaagggaaccttatggcgtgttagcggcttatagcacggaacgccatcagtttgattta
gaggatttgcactttctccaggcgatcgccaatgttttagcggcggcgatcgaccgccag
aaacgagagcgggctttgtgtgagagtgaagaacggtatgctttagctgtcgctggggcg
aatgatggactgtgggattggaatttgatcaccaaccgggtgtatttttccccgcgctgg
aaatccttgctggggtatcaggtggaaaatggggagaagatttctgagcataactcggtt
taccgtcccgaagagtggtttagccgagttcatcccgatgatattgaccccctgaaacag
gcgatcgccgatcatcttgccggagtcaccccccacttcaccagcgaacatcggatttta
gatgtacagggacagtatcgctggatgctctctcggggtctggctgtgcgcgatcgcgag
ggaaacccttatcgcatggcaggttcccaaaccgacatcagcgatcgtaaagccacggaa
gaagccaatatccgcctcgctgcctttcccaaatacaaccccaatcccgtcctcgcctgc
gattttcaaggggaaattgtctatgtcaatccagccaccgaacgggtgttagaagaatta
tgtctgggactggcaaccggctttttacccatgaatcatcgggagttagtcgtcaactcc
ctcaaccagggaaaatctgggtggcaggtggaacgctttgtccaggatcggctgttttat
tggttgtatcacccgattccttccctcaatattgtgcatattcacgtgatggacatcacc
gatcgccagaatgcccaagatacactacgtcatgaagccctgcacgatagtctcaccggc
ttaccgaatcgggccttgttcctaaaccgcctcacttctgctttgactcgtgcaaaaatt
caacgggattatcagtttgcggtgatttttctggatttagaccgctttaaagtggtcaat
gacagtttagggcattttattggggattgcctgctcgtcgctttggcaaaacggctgcaa
aactgtgtcggttctggtgatattctcgctcggtttgggggggatgaatttaccatttta
gtcgaacatatcccgaatattcaatcggcgattaaggtggctaaaaaaattcaaactgaa
ctaatttctccttttaatctcaaagggtatgaagtctttacctcagcgagtatgggcatc
gcccccagcaccctgagctatgagcatcccgaagatttactccgagatgcagatattgct
atgtatcgcgccaaagcccgaggcaaagcccgatatgaagtgtttgacaagaaaatgtta
gaaaatgccgtagctcagttaaccttagaaaatgatttgcggcgctctattctcaaaaat
ggtgattttcctctccccactccggtagaaaaatcaccctttataccgaaaaaaatcacc
aaacctgtgcctgattgggtcattcctgatcctgcgatttccgaagaaaaaatccaccgt
cagccgaacttagaaaggtcagaattcttgctccattatcaacccattgtggcgttagat
acagggctactctcaggatttgaagctctagtgcggtggcaacatccggaacgggggtta
gtgtttcccggggaatttatcccggtggcggaagaaacggggttgattttatctttaggg
gaatgggtgttgcgggaagcctgcctgcaaatgcaacagtggcatgagcaatttaaaacc
ccggaactgttgagtattagtgttaatttgtcgggtcagcagttgggacaaccggattta
ttggagcgcatcgatcgcattttagcagaaacccatctgaacccgagtagtttgaagttg
gaaattactgaaagtgtgttaatggaaaatgctgcattagcagcggaattattggaaaaa
ttaagatcacggaatattcatttgtgcattgatgattttggaacggggtattcttccctg
tctcatctggcgcaatttccgattaataccttgaaaattgataaatcatttgtgatggga
atggatggggataatgaaagttcggaaattgtccgggcgatcgccaccctcgcccataat
ctcgggatgtacgtcaccgcagaaggggtggaaaaagagcaacatttagtacaactttgg
tccttgcactgcgattatggacagggatattttttctcccgagggttggatcgggtggcg
gcccaaaaattgctagaacaatcccctcggtggtaa
DBGET
integrated database retrieval system
