Oleispira antarctica: OLEAN_C04430
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Entry
OLEAN_C04430 CDS
T04028
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
oai
Oleispira antarctica
Pathway
oai02020
Two-component system
oai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OLEAN_C04430 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OLEAN_C04430 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oai03021
]
OLEAN_C04430 (rpoN)
Transcription machinery [BR:
oai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OLEAN_C04430 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CCK74619
UniProt:
R4YR94
LinkDB
All DBs
Position
complement(494941..496479)
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AA seq
512 aa
AA seq
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MKASLQLKIGQQLTMTPQLQQAIRLLQLSTLDLQAEIQEALESNPMLEVEEAEHQSSDSP
SERTDQHDSIASADLNSNANNDSNFDSNSQDNSSETSTEDHLSGDTIPDTAADELPIDSQ
WEDSYQASAGVSSSAGSVDDDFDHDGRNSTTDNLQDHVLWQLNLTPMSPTDNEIAMALID
GLGDDGYLSVSLEDILESLDESLEVEEDEVLAVLHRLQQFEPAGVFAQDLQDCLLLQLKQ
LPENTLWLSEAKIVIEHHIALLGSKDYAQVMRKTKLSEDSLKEVLRLIQELTPRPGELII
SEQSEYVIPDVIVRKIKGEWRVELNPEIAPKLRVNNEYASLVKRADNSPDNAYLKDNLQE
ARWFIKSLLSRNDTLLKVATKIVEFQEEFFEIGDEGMKPLVLHDIAEAVEMHESTISRVT
TQKFMHTPRGIFELKYFFSSHVSTDSGGECSSTAIRAMIKKLIAEEPLKKPLSDNKIATI
LGEKGIQVARRTVAKYREAMMIPPSNERKRLF
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtcattgcaattaaaaatcggccagcaactgactatgacacctcagctgcag
caagctattcgcctgttacagctctctactcttgatttacaagctgaaattcaagaagcg
cttgagtccaaccccatgcttgaggttgaagaagcggagcatcagtctagcgatagcccg
agtgaacgtaccgatcaacacgattctattgccagtgcagaccttaatagcaatgctaac
aatgactcgaactttgacagtaatagccaagataatagctctgaaacatcaacagaagat
cacctaagtggcgatactattcccgataccgctgcggatgaactgcccattgatagccaa
tgggaagattcttatcaagcaagtgccggagtaagttcaagtgcgggctctgtcgatgat
gactttgatcacgacggccgtaatagcaccactgacaacctacaagaccatgttttatgg
cagcttaatttaaccccgatgagtccgaccgataatgaaatcgccatggcacttattgat
ggattgggcgatgacggctacttatctgttagccttgaagatattcttgaaagccttgat
gagtcgctggaagttgaagaagatgaagtgctcgcagtattacatcgcttacagcagttt
gaacccgctggagtattcgctcaagacctgcaagattgccttctattacagttaaaacag
ctgcctgaaaataccctttggcttagcgaagccaaaatagtcatcgaacaccacatcgcc
ttattgggcagtaaagattacgctcaggtcatgcgtaaaactaagctcagcgaagacagc
ctcaaagaggtattgcgcttaatacaagaactgactcctcgcccgggtgagttaatcatt
tcagaacaatctgaatacgttattcctgatgtcattgtccgtaaaatcaaaggcgaatgg
cgagtagagcttaaccccgaaatcgcgcctaaattacgagtaaataacgaatacgcctcg
ttagttaaaagagccgataacagccctgataacgcttatttaaaagacaacctacaagaa
gcacgctggtttattaaaagcttattgagtcgtaacgatactttgttaaaggtcgcgact
aagattgttgagttccaagaagagttttttgaaatcggcgacgaaggcatgaaacctctc
gtcttacacgatatagccgaggcggtagagatgcatgaatccaccatttcacgtgtaaca
acacagaaattcatgcacactccgagagggatttttgagcttaaatatttcttctccagc
catgtcagcaccgatagtggtggcgagtgttcatcgacagccatccgcgcgatgatcaaa
aaattgattgctgaagagcctttaaagaaacctctcagcgataacaagattgccacgatc
cttggggagaaaggcattcaggttgcacgtcgtacggtcgctaaataccgtgaggcaatg
atgattccaccgtcaaatgaacgaaaacgtttattttaa
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