Oleispira antarctica: OLEAN_C07140
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Entry
OLEAN_C07140 CDS
T04028
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
oai
Oleispira antarctica
Pathway
oai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OLEAN_C07140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oai03019
]
OLEAN_C07140
Enzymes [BR:
oai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OLEAN_C07140
Messenger RNA biogenesis [BR:
oai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OLEAN_C07140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
CCK74890
UniProt:
R4YKN9
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All DBs
Position
788931..790298
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AA seq
455 aa
AA seq
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MSTATTDVIPPVNVTTSFEELGLIPPLLARLTELEYQQPTPIQAQAIPSVLAGRDLIAGA
NTGSGKTATFALPLLQQLHAEKSSGSKNREGNYATGLVLVPTRELAKQVADSIRSYAVHF
NGAIKTVAVFGGVSVNTQMQALRGGTDILVATPGRLLDLISSNAIKLDMIKTLVLDEADR
MLSLGFAEELSALLALMPNKSGRKPKQILLFSATFPEQVKALTAELLNDPVEIQVQSADA
STLVQRVFTVNKGEKTAVLANLIKKHEWRQALVFVNSKNGCEHLAYKLSKHDITAEVFHG
DKGQGARSRVLEGFKSGDIEVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSG
RAGEVGLALSLIDYEDYHHFKIIEKKNKIWLEREEVTGFEVDESLIDPSYAEDKPMAPPA
GSGKSSGKKKAKKNLKSKSSINTDIWSGYSESDSE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgcaacaaccgacgtcataccgccagttaatgtcaccacctcttttgaggaa
ttgggtcttattccgcctttattagcgcgcttaactgagctggaatatcagcagccaacg
cctattcaagcgcaagctatcccaagtgtattagcggggcgtgaccttattgcaggggca
aataccggttctggtaaaacagccacttttgctttacctctattgcagcagctgcatgct
gaaaaatcatcaggaagcaaaaacagagaaggtaattatgcgacgggtctggtcttggtg
cctactcgtgagctagccaaacaggttgctgacagtattcgatcttatgccgtgcacttt
aacggcgcaatcaaaacggttgccgtgtttggtggtgtatcggtcaatactcagatgcag
gcattacgcggtggtactgatattttagtggcgactccaggtcgattactcgatttgatt
tcaagtaatgccattaagctcgatatgattaaaaccttggtgcttgatgaagccgatcgt
atgttgagcctaggctttgcagaagagctatcggcgctattagcgcttatgcctaataaa
tcagggcgaaagccaaagcaaatcttactcttctcagcgacatttcctgagcaagtaaaa
gcattaacggctgagttgctgaacgaccctgttgaaatacaagtacaaagtgcggacgcc
agcacgttagtacagcgtgtttttaccgttaacaaaggcgaaaaaacggccgtattagcg
aatctaattaagaaacatgaatggcgacaagcccttgttttcgttaactctaaaaacggc
tgtgagcatttagcctataagctttccaagcatgacattaccgctgaagtgtttcacggc
gataaaggccagggcgcacgtagtcgtgtgcttgaaggctttaaaagcggagatattgaa
gtattgattgcaactgacattgccgctcgtggtttagacatcgaaaaattgccagtagtc
atcaactttgatttacccagaagtccatccgactacatgcaccgtattggccgaagtggt
cgtgctggtgaagtgggcttggcgttatcgctgattgattatgaagattatcatcatttc
aaaatcatcgaaaagaagaacaaaatctggctggaacgtgaagaagttacgggctttgaa
gtggatgaatcgcttatcgatccctcttatgctgaagacaaaccaatggcgccacctgcc
ggtagcggtaaaagtagcggcaagaaaaaagccaagaaaaatcttaaaagcaagtcgtcg
attaataccgatatttggtcgggctattcagaatcagattctgaatag
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