Oleispira antarctica: OLEAN_C08280
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Entry
OLEAN_C08280 CDS
T04028
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
oai
Oleispira antarctica
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oai03009
]
OLEAN_C08280
Enzymes [BR:
oai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OLEAN_C08280
Ribosome biogenesis [BR:
oai03009
]
Prokaryotic type
rRNA helicases
OLEAN_C08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
SNF2-rel_dom
UBA_4
Cas3-like_C_2
SecA_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CCK75004
UniProt:
R4YSC8
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All DBs
Position
complement(902593..903996)
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AA seq
467 aa
AA seq
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MSAEITSFSDFFIHDRIEKALDNLRLRVPTDVQKASIPHALDGKDLQVCAETGSGKTLAY
ILPMMQKFLESKSVIQGTRGLILCPTRELARQVFKATKQFTDVTGMNVGLLTGGDDFKFQ
AAMLRKNPEIVVSTPGRLVDHIKRRSTDLVGLEILVLDEADRMLDMGFAEDMEIISGECN
EGHRQTLLFSATLHHKGIARVAAKVLDNPMEITTATVQDKHDNIKQQVILADDGAHKDRL
LSWLLSNDDYEKAIIFTNTRTESERLNVFLRQHSCRCAVLHGELSQDQRNATMQLFREGK
ITVLVATDVASRGLDVKGIDLVVNYDMARKGDDYVHRIGRTGRAGESGTAISLINHTEWN
LKAAIERYIKQDFEHRAIKELKGAYSGPKRLKASGKAAGIKKKKAGPGRDKRPGKGAAPA
TKKVSAKKANGPRPSRPQPKPSNLMDSKGFAPIKKKKNPAPHKPSDD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgctgaaataacttctttctctgatttttttattcacgatcgtatcgaaaaggcc
cttgataatcttaggcttagagttccaactgacgtgcagaaagcttcgatacctcacgcc
ttagatggcaaagaccttcaggtttgtgcagaaacgggcagtggtaaaacattggcgtac
atactgccaatgatgcaaaagttcttagaatctaagtctgtgatccaaggcacccgtggt
ttaattttatgcccgactcgtgagctagcgcgccaagtattcaaggcgactaagcagttc
actgacgtaaccggcatgaacgttggcctattgaccggtggtgatgactttaaattccaa
gccgcgatgttgcgtaagaatccagaaattgttgtttcgacccctggtcgtttagttgac
cacattaagcgtcgttcaactgatttggttggcctagaaattctggtattagatgaagcc
gaccgtatgttggacatgggcttcgctgaagacatggaaatcatctcgggcgaatgtaac
gaaggccatcgccagacgttattgttctctgcgacattgcaccacaaaggcatcgctcgc
gttgcagctaaagttcttgataacccgatggaaattaccactgcgacggttcaagacaag
catgacaacattaaacagcaagtcattctagccgacgatggtgctcataaagaccgtcta
ttaagttggttattatcgaatgatgactatgaaaaagccatcatcttcacaaatacccgt
actgagtcagaacgtttaaacgtgttcttgcgtcagcacagctgtcgttgtgcggtattg
cacggtgaattaagccaagatcagcgtaacgcgacgatgcagttattccgcgaaggcaag
atcaccgtattagttgctaccgacgttgcttcacgtggtttggatgttaaaggcatcgat
ctggttgtgaactatgatatggcacgcaaaggcgatgattatgttcaccgtattggccgt
acgggccgtgcgggtgaatccggaactgcgatctcgctgatcaaccatactgagtggaac
ttaaaagcagctatcgaacgctacattaagcaagattttgagcatcgcgcgattaaagaa
ttaaaaggtgcttacagtggccctaagcgcttaaaagcgtctggtaaagcggcaggtatt
aagaagaagaaagccggccctggtcgtgataaacgtcctggtaaaggtgctgctccagca
acgaagaaagtcagtgctaaaaaagcaaatggcccacgccctagtcgtcctcagccaaag
ccaagcaacttgatggattctaaaggtttcgcaccgatcaagaagaagaaaaacccagca
cctcataagcctagtgatgactaa
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