Oleispira antarctica: OLEAN_C10600
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Entry
OLEAN_C10600 CDS
T04028
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
oai
Oleispira antarctica
Pathway
oai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OLEAN_C10600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oai03019
]
OLEAN_C10600
03009 Ribosome biogenesis [BR:
oai03009
]
OLEAN_C10600
Enzymes [BR:
oai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OLEAN_C10600
Messenger RNA biogenesis [BR:
oai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OLEAN_C10600
Ribosome biogenesis [BR:
oai03009
]
Prokaryotic type
rRNA helicases
OLEAN_C10600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CCK75236
UniProt:
R4YKT5
LinkDB
All DBs
Position
1139743..1141635
Genome browser
AA seq
630 aa
AA seq
DB search
MSDTPETTEVTTEVETTIPAEATAVVEDQGPQFTDLGLPTTLLRVLDEMGYKKPSPIQAQ
AIPPLLEGKDVLGLAQTGTGKTAAFALPILARTDAASRTPQVLVLAPTRELAMQVAKACE
DYAKYTPGLKVAAVYGGQDYGTQIRAIRGGAQWIVGTPGRIMDHLKKGSLSLTDIKAVIL
DEADEMLRMGFIDDVDWILGHAPKERQVALFSATMPKQIKHIASTHLNNPIEIKIESKTA
TASTIEQRYWFVGGAHKNDALLRITEVEDCDATMVFVRTKQATEEVADFMKLNGVKCEAL
NGDIPQAQRERVVDKLKKGTLDMIVATDVAARGLDVERISHVINYDIPFDAESYVHRIGR
TGRAGRSGKAIMFVRGRERRMLSTIERTTRQRIEEMPLPTAKDVNAKRRERFQEKVQATI
GNPQAVMFKEMINELITDKELDVVEVASALAHLAQNGIPLFLNENERSRPPQREREERSD
RNERGDRPQRERAPRKSPGDVSTKAMPLKDSPDVDMVRFRMEVGYQDGVKPGNIVGAIAN
EADLESKFIGHIEIFDDFSMVDLPDGMPETVMSKLKATRICGQPLHLQVADGAKPVNRKA
PSGRPAGGNRRPSNGDRRPQGGDRRPRRDS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacactccagaaacaacagaagtaactaccgaagttgaaactacaatccctgct
gaagcaacagctgttgttgaagatcaaggtccacaatttactgacctaggtttaccaact
acattattgcgcgtattggatgaaatgggttacaaaaaaccttctccaattcaagcacaa
gcaatcccacctctattagaaggtaaggatgtattaggtctagcgcaaacaggtactggt
aaaacagccgctttcgctttacctatcttagcgcgtacagatgctgctagccgcacacca
caagtattggttcttgcccctactcgtgagcttgcaatgcaggttgctaaagcctgtgaa
gactacgctaaatatactccaggcctaaaagttgccgcagtatatggtggtcaagattac
ggcacacagattcgcgcaatccgtggtggtgctcaatggatcgttggtacgcctggtcgt
atcatggatcacttgaagaaaggctctttgtctttaactgatattaaagccgttattcta
gatgaagctgacgaaatgctacgcatgggcttcatcgatgacgtagattggatcttgggt
cacgcacctaaagaacgtcaggttgctttgttctctgcaacaatgcctaagcaaattaag
cacattgcttctacgcacctgaacaacccgatcgaaattaaaatcgaatcaaaaacagcg
actgcttctaccattgaacagcgttactggtttgtgggtggtgcacataaaaatgatgca
ttgctacgtattactgaagttgaagattgcgatgcgacgatggttttcgtacgtactaag
caagcaacagaagaagttgctgacttcatgaagttgaacggcgtgaaatgtgaagctcta
aacggcgacattccacaagcccagcgcgagcgtgttgtcgacaagcttaagaaaggcaca
ctagacatgatcgttgcaacagacgttgctgcacgtggtcttgatgttgaacgtatatct
cacgtaatcaactacgacattccttttgatgctgaatcttacgttcaccgtattggtcgt
actggccgtgctggacgttctggtaaagccattatgttcgtacgtggtcgcgaacgtcgt
atgcttagcacgattgagcgtactactcgtcagcgtatcgaagaaatgccattaccaacg
gctaaagatgtgaacgctaagcgtcgcgaacgtttccaagagaaagttcaagcgacaatt
ggtaacccacaagcggttatgttcaaagaaatgatcaacgaattgatcactgataaagag
ttagacgttgttgaagttgcttcagcactagcgcaccttgcgcaaaacggcattccttta
ttcttgaacgaaaacgaacgttcacgtccacctcagcgtgaacgtgaagagcgtagcgat
cgtaacgaacgcggtgaccgtccacaacgtgaacgtgctcctcgtaagagccctggcgac
gtaagcactaaagcgatgccgcttaaagatagcccagatgttgatatggttcgcttccgt
atggaagtgggctaccaagatggcgttaagcctggcaacatcgttggcgcaattgctaac
gaagcagatcttgagagcaagttcattggccacatcgaaatctttgacgatttctctatg
gttgatttacctgatggcatgccagaaacggttatgtctaagctaaaagcgactcgcatt
tgtggtcaacctctgcacctacaagttgcagatggcgctaagccagtaaatcgtaaagct
ccatcaggtcgtcctgctggtggcaaccgtcgtccaagtaatggcgatcgtcgtccacaa
ggtggtgaccgtcgcccacgtcgtgattcttag
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integrated database retrieval system
