Oleispira antarctica: OLEAN_C17580
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Entry
OLEAN_C17580 CDS
T04028
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
oai
Oleispira antarctica
Pathway
oai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OLEAN_C17580 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oai03019
]
OLEAN_C17580 (recQ)
03400 DNA repair and recombination proteins [BR:
oai03400
]
OLEAN_C17580 (recQ)
Enzymes [BR:
oai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OLEAN_C17580 (recQ)
Messenger RNA biogenesis [BR:
oai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OLEAN_C17580 (recQ)
DNA repair and recombination proteins [BR:
oai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OLEAN_C17580 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCK75934
UniProt:
R4YTN4
LinkDB
All DBs
Position
complement(1923824..1925662)
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AA seq
612 aa
AA seq
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MMQQAYQVLNRTFGYQEFRPPQDQIIQTLLNGEDAFVLMPTGGGKSLCYQIPALVRNGIG
IVISPLIALMQDQVDALTQAGIRAACMNSSMSGEHNARTEQLALSGQLDIIYLAPERLTL
PRTIEWLQQCQLSLFAIDEAHCVAQWGHDFRSDYLQLSLLQQYFPSIPRVALTATADVKT
REEIVFRLGLQNAKVFVSGFDRPNIQYRITQKNTPKAQLLNFLQTEHQNHAGIVYCLSRK
KVDSTALWLTEQGINALPYHAGLDKTVRQVNQQRFLREDAIVMVATIAFGMGIDKPDVRF
VAHLDLPKSIEAYYQETGRAGRDGQPATAWMAYGLEDVIKLKQMMAKSEGDEQFKRIEQQ
KLNAMLGLAELTDCRRKMLINYFGDQLSNHYPDPKHCGNCDNCLTSVQTWDATEASRKAL
SCVFRTDQRFGVVHLINVLRGKSSEKIKQFNHQNISTFGIGTELSDGQWRSVFRQLVAHG
YLNVNYDYGQLSLNESSRTLLQGKETLTLRLDSFESVGKNKNSTSKYSSNKEAEIPEQDQ
ALWQALRECRTQLAKTQGIAPFMIFHDATLKSMLQLKPQNQHEFAKLSGVGQKKLDQYGP
AFLMVLEQFSPD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcaagcttatcaggtattgaatcgtacttttggttatcaagagtttcgcccg
ccgcaagatcaaatcattcaaaccttactcaatggcgaagatgcttttgtcttgatgccc
acaggcggtggtaaatccctgtgttatcaaattcccgccttagtacgcaacggcattggc
attgttatctcaccgctcattgccttaatgcaagatcaagtcgatgcactcacccaagcc
ggtattcgcgccgcgtgtatgaattcgtctatgtctggcgaacacaatgcgcgcaccgag
caactcgcgctcagcggccagctcgacatcatctacctcgcgcccgaacgattaacactg
ccgcgcaccattgaatggctacaacagtgccaactctctcttttcgccattgatgaagcg
cactgcgttgctcaatggggtcatgactttcgcagtgactacctgcaactcagtctgttg
cagcaatattttcccagcattccaagagtcgccttaaccgcaaccgctgatgtcaaaact
cgcgaagaaatcgtatttcgtttaggactgcaaaatgccaaggtctttgtttcaggattt
gatcgccccaatattcaatatcgtataacgcaaaaaaacactccgaaggcgcagctgcta
aattttttacaaacagagcatcaaaaccatgcggggattgtctattgcttatcgcgcaaa
aaagttgatagcaccgcgctctggttaacagagcaaggcattaatgccctgccgtatcac
gcaggtttggacaaaacggtacggcaggtcaatcaacaaagattcttacgggaagatgcc
atcgtcatggttgccaccattgcctttggtatggggatagataagcctgatgtgcgcttt
gttgcccacctagacctgcctaaaagtattgaagcatattatcaagaaaccggtcgtgca
ggtcgcgatggtcagcccgcaacagcctggatggcgtatggccttgaagatgtgatcaaa
ttaaaacagatgatggcgaaaagtgaaggcgatgaacaattcaagcgcatcgagcagcaa
aaactaaacgccatgttaggcttagcagaactcaccgattgccgtcgaaaaatgctcatc
aactattttggcgatcagctcagtaatcattacccagatccaaaacactgcggcaactgc
gataactgcctgacttcagtgcaaacctgggatgcgacagaagcctcgcgtaaagcctta
agctgcgtatttcgcacagaccaacgctttggtgtggttcacttaattaatgtattgcgt
ggcaaaagcagcgaaaaaattaaacagtttaatcaccaaaacatttcaacttttggtatt
ggtacagagttaagtgatggacaatggcgttcagtttttcgtcaactggttgcccacggt
tatctcaacgtcaattatgactacggccaactctcgctaaacgaaagcagtcgaacccta
ttacaagggaaagaaacattaaccctgcgcttggacagttttgaatcggtgggcaaaaat
aaaaacagtacgagcaaatacagctcaaataaagaggctgaaatccccgagcaagaccaa
gcactctggcaagcattgcgtgagtgtcgaacgcagctggccaaaacccaaggcatcgca
ccctttatgatttttcatgacgcaacattaaaatccatgctgcaattaaaaccacagaat
caacatgaatttgccaaactctcaggagtgggccaaaaaaagctcgatcaatatggccct
gcgttcctgatggttctagagcaattcagccccgattag
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