Oleispira antarctica: OLEAN_C19100
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Entry
OLEAN_C19100 CDS
T04028
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
oai
Oleispira antarctica
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oai03021
]
OLEAN_C19100 (rapA)
Transcription machinery [BR:
oai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OLEAN_C19100 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCK76086
UniProt:
R4YMC3
LinkDB
All DBs
Position
complement(2083578..2086358)
Genome browser
AA seq
926 aa
AA seq
DB search
MFEVGQRWISDTESDLGLGMVQEVNFRQVAILFPVADEVRRYSKEQAPLTRIKFNIEDTV
LLEDGTKLTITEIQEMNGILFYGDADRIIPETQLSGHIQLSQASERLLAGQVDNSKAYEL
RLRALQMKSKLQERKHYGLVGSRTTLLPHQLFIANEVSSREAPRVLLADEVGLGKTIEAG
MIMHSLLLSERIERVLVLLPEALTHQWLVEMVRRFNLRFSVLDEGRCLALEDQENGGNPY
LQQQLVLAPLNAVANDPKRREQILSAGWDMVVVDEAHHLGWSPQSHDESYGLVESLAHEC
PGLLLLTATPEQLGMEGHFARLRLLDPERFHNLEEFIQEQSQFQPVANAAQSLLSGSELT
DDERKALKALLNQDIPAQPETEQAQAWIKQLIDQHGTGRVMFRNTRSAMEGFPNREVIAQ
PFILPEAYQGLTGVEGLYPEREVADWESVDPRIDWINELIKANKGEKFLLITHQQKTVLQ
IERALWEKYGTPCAVFHEDMDMIERDRAAAYFAEQEGGAQILLCSEIGSEGRNFQFARHL
VLFDLPDNCDLIEQRIGRLDRIGQKFDIQLHIPYFENHASERLFELLNQGVDVFSHPNPL
AQSLLNHHHTQMTAALESPNVSNLHSLVDALIPEREAQQQELEQGRDRLLELQSCDPQKS
KALLDRILADDRLDQAVLPSFLEQVCDVYGIIQQDHSHHCFILMPGDHMLTSYFPHLPED
GLTYTCRRDVAVARDDVQFFTWEHPLIVGALDLILSEDHGNSNVAYVENHQFSTGDFYFQ
AQYTLESQAPKSLQIQRYLPAEGIHIAVDPEGKVEFNEPDYLDFPEDLKRATATGLVKRV
EAGIKKSLKIAKEAAEAQLPKQLALGAKHMSIELDGEILRLQELQKTNRNIRDSEIELLQ
QKKEALQQAISQANYKMDNIRIVFCG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagttggtcagcgttggatcagtgacacggagtccgatttaggcctagggatg
gttcaagaagtaaatttccgccaggtggcgattctattcccagtggcagatgaggttagg
cgctattcaaaagaacaagcaccccttactcgtattaaattcaatatcgaagatactgtc
ttattagaagatggcactaagttgacgattactgaaattcaagaaatgaacggtattttg
ttttatggcgatgccgaccgtatcattcccgaaactcagttaagcggacacattcaactg
agccaagcgtcagagcgcttattagccggccaggttgataacagtaaggcttacgagttg
cgtttacgcgcactgcaaatgaagagcaagctgcaagagcgtaagcactatggcttagtc
ggaagtcgtaccaccctacttccgcaccagttatttattgccaatgaagtctctagtcgt
gaagcgccgcgtgttttgcttgctgacgaagttggtttaggtaagacgattgaagctggc
atgattatgcacagtcttttattaagcgaacgtattgagcgtgttttggtattattacca
gaagccctaactcaccagtggttagtcgagatggttcgtcgctttaatttacgcttcagt
gtcttagatgaaggccgttgtttggcattagaagatcaagaaaacggcggcaatccttat
ttacaacagcaactggtattggcgcctttaaacgccgttgctaatgatcctaaacgtcgc
gagcaaattttgtcggcgggctgggatatggttgtggttgatgaagcgcatcatctaggt
tggtcgcctcagtctcacgatgaaagctatggcttagttgagtctttagcgcatgaatgc
ccaggtttattattgctaacagcaacgccagaacagctagggatggaaggtcatttcgcc
cgtttacgcttattggatcctgaacgttttcataacttagaagaatttattcaagagcaa
tctcagtttcagcctgtggcaaatgccgctcagtctttattgtcgggtagcgaattaacg
gatgatgagcgtaaagcgctgaaagcgttattgaatcaagatattcctgctcaacctgaa
accgagcaagcacaagcctggatcaagcagttaattgatcaacatggcactggccgcgtg
atgtttcgcaatacacgaagcgcaatggaaggttttcctaatcgtgaagtgattgcgcag
ccctttatcttgcctgaagcttatcagggcttaacaggcgtcgagggtttatatcctgag
cgtgaagttgctgattgggaaagtgttgatccgcgtattgattggattaatgagctgatt
aaggcaaataagggcgagaagttcttattgattacccatcaacagaagaccgtcttacaa
atcgaacgtgctttgtgggaaaagtacggcaccccttgtgccgttttccatgaagatatg
gatatgattgagcgtgaccgcgcagcggcttattttgctgaacaagaaggcggtgctcaa
atccttctttgcagtgaaatcggcagtgaaggccgtaacttccaattcgctcgtcactta
gttttatttgatctgccagacaactgcgatttaatcgaacagcgtatcggtcgtcttgac
cgtatcggtcagaagtttgatatccagctgcatatcccatactttgaaaatcacgcttct
gagcgtttgttcgagctgttgaatcagggtgttgacgtattcagccaccctaacccgctt
gcacagtcgttattgaatcatcatcatactcagatgacagcagctcttgagagccctaac
gtatcgaatttgcatagcttggttgatgcactgattcccgaacgtgaagctcaacagcaa
gaactagagcagggtcgtgaccgtttattagaattgcagtcttgcgaccctcagaaatcg
aaagcgttgttggatcgaattctggccgatgacagacttgatcaagccgtattgccgagt
ttcttagagcaggtttgtgatgtttacggcattattcaacaagatcacagtcatcattgc
tttatccttatgcctggggatcacatgttaacgagctacttcccgcatttaccagaagat
ggcttaacctatacttgtcgtcgtgatgtggcagttgctcgtgatgacgttcagtttttc
acttgggaacatccattgattgtgggtgctcttgatctgattttgtcagaagatcatggt
aattcgaacgtagcgtatgttgagaatcatcagttctctaccggcgacttctactttcaa
gcgcaatacaccttggaaagtcaagcgcctaagtcgttacagattcagcgttatttacct
gctgaaggaatacacattgcggtagatcctgaaggcaaggttgaattcaacgagcctgat
tatttggattttccagaagatcttaagcgcgctactgcgacgggtcttgtgaagcgtgtt
gaagcaggcattaaaaagtcgttgaagattgccaaagaagccgcagaagctcagctacca
aagcagttggctttgggtgctaagcacatgtctattgaattagatggcgaaattctacgc
ctgcaggaattgcagaaaaccaaccgcaatatccgcgacagtgagattgagttgttacag
cagaagaaagaagcacttcagcaagcaattagccaagcgaactataagatggataacatc
cgaatagttttctgcgggtaa
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