Oleispira antarctica: OLEAN_C32770
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Entry
OLEAN_C32770 CDS
T04028
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
oai
Oleispira antarctica
Pathway
oai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OLEAN_C32770 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oai03019
]
OLEAN_C32770 (pnp)
03016 Transfer RNA biogenesis [BR:
oai03016
]
OLEAN_C32770 (pnp)
Enzymes [BR:
oai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OLEAN_C32770 (pnp)
Messenger RNA biogenesis [BR:
oai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OLEAN_C32770 (pnp)
Transfer RNA biogenesis [BR:
oai03016
]
Prokaryotic type
tRNA degradation factors
OLEAN_C32770 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
EFP
S1_2
DUF3016
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
CCK77453
UniProt:
R4YU15
LinkDB
All DBs
Position
complement(3719507..3721612)
Genome browser
AA seq
701 aa
AA seq
DB search
MSIIPTAITKTFQFGEDTVTLETGRIARQASGAVLVTIGKTQVLTTVVGAKSTKPGQDFF
PLSVHYIEKTYAAGRIPGGYLKREGRPSEKETLTSRLIDRPIRPLFPKGYMSEVQVVCTV
ISADKNVDPDIAAMIGTSAAISISGIPFSGPIGAARVAFNEEKGYVLNPSYEVLENSLLD
MVVAGTNDAVLMVESEADELTEDEMLGAVLFAHQEYQCVVTAVAEFAATVNTPVWEWTAP
EFDTALFDAVSAQAGAAIGDAYLTTDKMERYSKIDAAKKAAVEALCGEEEGKPSADDIAG
MISKIQKNIVRQRSVAGEPRIDGRDNDTVRAITVETGVLGNVHGSALFTRGETQAIVTAT
LGSGRDAQMVDTLFGRTEDPFMFQYNFPPYSVGEAGRMGGVGRREIGHGRLARRGIQAMM
PKHEDFPYSIRVVSEITESNGSSSMASVCGASMALMAAGVPMKAPVAGIAMGLIKEDNGF
AVLTDILGDEDHLGDMDFKVAGTDQGITALQMDIKIQGITEEIMDIALQKANTARMTILA
SMNACIATPAAEMADNAPTMSTIKIDPDKIRDVIGKGGATIRSITEQTGADIDIDDSGNI
KIFAAGKEASDAAKAMIEGITAEAEVGKIYRGKVMKLADFGAFVNIIPGKDGLVHISQIS
EERVENVADYLKEGQEVNVNVLDVDPKGRIKLTMKGVAQEA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagcattattcctacagcgattaccaaaacgtttcagtttggtgaagatactgtaacg
ctagaaactggacgtattgcacgtcaggcttctggtgctgttttagttaccattggtaag
actcaagtattaaccacagtggttggtgctaaatctactaagccaggacaagactttttc
ccactgtctgttcactacattgaaaagacttatgctgcaggtcgtatccctggtggttac
ctgaagcgtgaaggtcgtccttctgaaaaagaaactctgacttctcgtcttattgaccgt
ccaattcgtccattattccctaagggttacatgagcgaagttcaggttgtttgtactgtg
atttctgcagacaagaacgttgatccagatatcgcagccatgatcggtacttctgctgct
atctctatttctggtattcctttcagtggaccaatcggcgcagcccgtgttgctttcaat
gaagagaaaggctacgtattaaacccaagctatgaagttttagaaaattcattattggat
atggttgttgctggtactaacgacgctgtattgatggttgaatctgaagcagatgagctg
actgaagatgaaatgttgggcgctgtattattcgctcaccaagaataccagtgtgttgtt
actgctgtagctgaatttgctgcgactgttaatacaccagtatgggaatggactgctcct
gagtttgatactgcattatttgatgctgttagtgcacaagccggtgctgctattggtgac
gcatatcttacgactgataagatggagcgttatagcaaaatcgatgcggctaagaaagca
gcggttgaagctttgtgtggcgaagaagaaggcaaaccgtctgcagacgatattgccggc
atgatttctaagatccaaaagaatatcgttcgtcagcgcagtgttgctggtgagcctcgc
atcgatggtcgtgataacgatactgttcgtgcgattacggttgaaacgggcgttctagga
aatgttcacggttctgctttgttcactcgtggtgaaactcaagcaatcgttactgcaact
ctaggttctggtcgtgatgctcagatggttgatacgttgttcggtcgtactgaagatcca
tttatgttccagtacaacttccctccttattctgtaggtgaagccggacgtatgggcggt
gttggtcgtcgcgaaattggtcacggtcgtctagcgcgtcgtggtatccaagcgatgatg
cctaagcacgaagatttcccttattcaattcgtgtcgtatctgaaattacagaatctaac
ggttcttcttctatggcttctgtttgtggtgcttctatggcattgatggcagctggcgta
ccaatgaaagctccagttgcgggtatcgcaatgggtcttatcaaagaagacaacggtttt
gctgtattgactgatatcttgggtgatgaagatcacttaggcgacatggactttaaagta
gctggtactgatcaaggtattactgctctacagatggatatcaagattcaaggtatcact
gaagagattatggatatcgcattgcagaaagcaaacacagctcgtatgacgattcttgcg
tctatgaatgcttgtattgcgactcctgctgctgagatggctgataacgcacctactatg
agcacgatcaaaatcgatcctgataagatccgtgacgttattggtaaaggcggcgcgact
atccgttcaatcactgagcagactggtgcagacatcgatatcgatgatagcggtaacatc
aagatcttcgcggctggtaaagaagcatctgatgcagctaaagcaatgatcgaaggcatt
acggctgaagctgaagttggcaagatctaccgtggtaaagttatgaagctagccgatttc
ggtgcttttgttaacattatcccaggtaaagacggtttggttcacatctctcagatctct
gaagagcgtgtagagaacgttgctgattacttgaaagaaggccaagaggttaacgttaat
gtattagacgttgatcctaagggccgtatcaagttgaccatgaagggtgttgcgcaagaa
gcgtaa
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