Oleispira antarctica: OLEAN_C38910
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Entry
OLEAN_C38910 CDS
T04028
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oai
Oleispira antarctica
Pathway
oai03420
Nucleotide excision repair
oai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OLEAN_C38910 (uvrD)
03430 Mismatch repair
OLEAN_C38910 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oai03400
]
OLEAN_C38910 (uvrD)
Enzymes [BR:
oai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OLEAN_C38910 (uvrD)
DNA repair and recombination proteins [BR:
oai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OLEAN_C38910 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
OLEAN_C38910 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCK78067
UniProt:
R4YSI9
LinkDB
All DBs
Position
complement(4376352..4378619)
Genome browser
AA seq
755 aa
AA seq
DB search
MDVSSILDHLNDPQRNAVAANSKHQMVLAGAGTGKTRVLVHRIAWLLQVENISPFSIMAV
TFTNKAAKEMRARLETLIQVPVNGMWVGTFHGLAHRLLKQHWREANLPQNFQILDSDDQL
RLVKRILRATGVDETKFPPKQLHWYINGQKDEGRRAAHVVPSADPFSRTQLQVYQAYEQA
CQQGGMVDFGEILLRAHELWLNHPDLLAHYQGRFRNILVDEFQDTNEIQYAWIRMLAGDQ
VSVMAVGDDDQSIYGWRGAKIANIRNFQNDYPGAELIKLEQNYRSTATILAAANAVIENN
TGRMGKELKTDGELGEKISLYSAFNEQDEARYIADQIETFSNTGRARKDIAILYRSNAQS
RTLEESLLRQGIPYRIYGGQRFYDRLEIKNALAYLRLLLNRHDDAAVERVINVPARALGD
KTVAIIRGHAREQGCSMWQAVCEAATLGILPKRASAAAQGFVDLIDSMAEGAGELELHEI
MDQVITQSGLIEHHKKEKGEKAQARLDNLDELINAARQFITQDGVDMAMMAEEAAAETGE
DPESLMEGAADSLYDLAVFLDTAALDAGDTQASEGDDAVQLMTLHSAKGLEFPLVFLTGL
EEGLFPHKMSMDSAEGLEEERRLAYVGITRAMERLVITYAENRRLHGQENFSTPSRFIRE
IPSEYVQEVRLKNTITRPLTASKSSSLSFAEDAPEGVPFKLGERVFHAKFGEGQVLQFEG
SGASARIQVNFEWEGTKWLVVAYAKLQSMDANDDF
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcaagtattttagatcatttaaatgatccgcaacgcaatgccgttgccgct
aatagcaagcatcaaatggttctcgccggagctggaacgggtaagacacgagtgcttgtg
caccgtatcgcctggcttttacaggtggagaacatttcgccgttttcgatcatggcggtg
accttcaccaacaaagcggcgaaagaaatgcgggcgcgtttagaaacgcttatccaagtt
ccggttaatggaatgtgggtcggtactttccacggtcttgcgcaccgcttattaaagcag
cattggcgcgaagcgaacttgccgcagaacttccaaatcctagacagtgatgatcagtta
cgactggttaaacgtatcttaagagcgacgggggtggatgaaactaaattcccacctaaa
cagttacattggtacatcaacggccaaaaagatgaaggtcgtcgcgctgcgcatgttgta
ccttctgccgatccgttcagccgtactcaattacaagtgtatcaagcctacgagcaagcc
tgtcagcaaggcggcatggtcgattttggtgagattctattacgcgctcatgaactgtgg
ttgaatcatcccgatttattagcccactaccaaggtcgtttccgcaacattttggtagac
gagtttcaggataccaacgaaattcaatacgcttggattcgcatgctcgcaggagatcaa
gtctctgtgatggcggtaggtgatgacgatcagtctatctacggctggcgtggggcaaaa
attgccaatatccgtaatttccaaaatgattacccaggcgcagagctgattaagctcgaa
caaaattatcgctccaccgcgaccattcttgccgcggccaacgccgtcattgaaaacaat
accgggcgaatgggcaaagagttaaaaacggatggcgaactgggcgagaaaatctccctc
tattccgcgtttaacgaacaagatgaagcgcgctacatcgctgaccagattgaaacgttt
tctaataccggacgcgcgcgcaaagacatcgccattctttatcgctccaacgcacaatct
cgtaccttagaagaatctttattacgccaaggcattccttatcgaatttatggcggccag
cgcttctacgatcgcttagaaattaaaaacgcgttggcgtatctacgtctgttattaaac
cgccatgatgatgccgcagtagagcgtgtgattaatgtgcccgcccgtgccttaggcgat
aaaaccgttgccattattcgtggtcatgcgcgtgagcaaggttgctctatgtggcaggcg
gtttgtgaagccgcaacactgggtattttacccaagcgtgccagcgccgccgctcaaggc
tttgtcgatttaatcgatagcatggcagaaggtgctggggaattagaactgcatgaaatt
atggatcaagtcatcacccagtcgggcttgattgaacaccataaaaaagagaagggcgaa
aaagcgcaagcgcgtttggataacctcgacgaattaatcaatgctgcgcgccagttcatc
actcaagacggtgtggacatggcgatgatggcagaagaagccgcggctgaaacaggggaa
gacccagaatcgctaatggaaggcgccgccgatagtctttatgacctagccgttttctta
gatactgccgcgttagatgcaggtgatacgcaagcgagtgaaggtgatgatgccgtgcag
cttatgaccttgcactcggccaaaggtttggaatttccactggttttcctcacgggttta
gaagaaggtttattcccgcataaaatgtcgatggacagcgcagagggtttagaagaagaa
cgccgtctagcctacgtaggtattactcgtgcaatggaacgtttggtgattacttatgcc
gaaaaccgtcgcttacatggccaagagaatttcagtacaccgtcgcgttttattcgtgaa
attccttctgagtatgttcaggaagtacgcttaaaaaataccataacccgtccactgacc
gcatcaaagtcttctagtctgagttttgccgaagacgcaccagaaggcgtgccgtttaag
ttaggcgaacgcgtcttccatgcaaaatttggcgaaggtcaggttctgcaattcgaaggc
agtggtgccagtgcgcgcattcaagtgaactttgaatgggaaggcaccaagtggctagta
gtggcgtatgccaagctgcagtcaatggacgctaacgacgatttttaa
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integrated database retrieval system
