Oxalobacter aliiformigenes: NB647_00165
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Entry
NB647_00165 CDS
T08749
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal03030
DNA replication
oal03430
Mismatch repair
oal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NB647_00165 (holA)
03430 Mismatch repair
NB647_00165 (holA)
03440 Homologous recombination
NB647_00165 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oal03032
]
NB647_00165 (holA)
03400 DNA repair and recombination proteins [BR:
oal03400
]
NB647_00165 (holA)
Enzymes [BR:
oal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NB647_00165 (holA)
DNA replication proteins [BR:
oal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NB647_00165 (holA)
DNA repair and recombination proteins [BR:
oal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NB647_00165 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
PHAX_RNA-bd
CNOT1_HEAT
Motif
Other DBs
NCBI-ProteinID:
WAV89283
LinkDB
All DBs
Position
35088..36107
Genome browser
AA seq
339 aa
AA seq
DB search
MHLKYDTLPSHLDKEQLASLYVLTGDEQLLLLEAADLIRKTARKNNIGEREIMTVERGFK
WGQLHAANNALSLFGDRKLIELRIPGGRPGKDGSLALQEYVSELNPDNVTLITLPKLDWT
TQKSAWVGTLQKNGIYIEVPSIDLPKLGDWIASRLKKQNQTASQPCIDFLVERVEGNLLA
AHQEIQKLGLLYPEGELDFEQIKNSVLNVARYDIFKLNEAMLSGNRSRFIRMMDGLKGEG
EPLPLVLWTFTDEIRTLLKCKTALENGQPFPAIAKTLRLRGQKEKLVQTAVNRLGKKEIQ
AAMQQIAQIDKIIKGLRSESWMDDAWDALTQLGLSLART
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaagtatgacacgctcccatcccacctggacaaggaacaactggcctccctg
tatgttctgaccggcgacgaacagcttctgcttcttgaggcagcggacctgatccgcaaa
acagcgcgcaaaaacaatatcggcgagcgtgaaatcatgacagtcgaacgcggcttcaaa
tggggacagcttcatgcggccaacaatgcactttcccttttcggagaccgtaaactgatc
gaacttcgcataccggggggaaggcccggcaaagacggaagcctggccctgcaggaatat
gtttccgaactcaatccggataatgtcacactgattacactgccaaagctcgactggaca
acacagaaatccgcatgggtcggcactttgcagaaaaacgggatctatatcgaggttcct
tccatcgatttgccgaaactgggagactggatcgcctcaaggctgaaaaaacagaatcag
acggccagccagccatgcatcgactttctcgtggaacgggtcgagggcaatcttttggcc
gcccaccaggagatacagaaactcgggttactttatcccgaaggcgaacttgactttgaa
cagatcaaaaattccgtactgaatgtcgcccggtacgacattttcaagctgaacgaagcg
atgttaagtggaaaccgctcccgtttcatccggatgatggacggtttgaaaggtgaaggg
gaaccgcttccgctcgtgctgtggacattcaccgacgaaatacggactcttttgaaatgc
aaaacggcacttgaaaacgggcagccttttcccgccatagcaaagacactccgtttgaga
ggtcaaaaagaaaaacttgtccagaccgccgtaaacagactcgggaaaaaagaaatacag
gcagccatgcagcaaatcgcccagatcgacaaaatcatcaagggactgcgatccgaatcc
tggatggatgatgcctgggatgcactgacacaactgggactttcactggccagaacttga
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