Oxalobacter aliiformigenes: NB647_01070
Help
Entry
NB647_01070 CDS
T08749
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal03030
DNA replication
oal03410
Base excision repair
oal03420
Nucleotide excision repair
oal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NB647_01070 (polA)
03410 Base excision repair
NB647_01070 (polA)
03420 Nucleotide excision repair
NB647_01070 (polA)
03440 Homologous recombination
NB647_01070 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oal03032
]
NB647_01070 (polA)
03400 DNA repair and recombination proteins [BR:
oal03400
]
NB647_01070 (polA)
Enzymes [BR:
oal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NB647_01070 (polA)
DNA replication proteins [BR:
oal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NB647_01070 (polA)
DNA repair and recombination proteins [BR:
oal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NB647_01070 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NB647_01070 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WAV89453
LinkDB
All DBs
Position
210515..213259
Genome browser
AA seq
914 aa
AA seq
DB search
MNKLLLLVDGSSYLYRAYHALPDLRNAEGEPTGAIYGFLNMLHRLQKDYPTAYVACIFDA
KGKTFRNDLYQEYKANRSAMPDDLVKQTAPIHELVRMLGWPVLSVEGIEADDVIGTLVTI
AGKEGFDIVVSTGDKDMSQLVKDHVMLVNTMNNEVMDTEGVIRKFGVPPERIIDYLSLIG
DTSDNIPGVSKVGPKTAVKWLAQYGSLDGVIENAGTIKGTAGDNLRKSLDWLPQARKLIT
IRTDCDLSGQFKSINETLVKKPEDIAGLRKAYERYGFKSWLRELNATSQEKNDDKNQFGL
FNEPAFQQGEFVGKQKYETVLTEKQLDNWLRKIDRAELTSLDTETTSLDSMKARLVGISL
SVEPGLAAYIPLAHRTIEPVEQLPVDYVLGKLKNWLENPCKKKVGQNLKYDCHIFANYDI
HLQGIEHDTLLESYVLESHRRHDMDSLSERLLEHKPISYEEICGKGASQIGFDQIELDCA
TEYAAEDADVTLQLHKKMWPQIEKNEGLRFIYEKIEIPTLVVLQKMERNGVLIDPERLLG
QSSELGTKMDELEKSAYRAAEQAFNLNSPKQLAEILFDKLGLPMIKKTPSGAPSTSEEVL
EKLSLDYPLPKIILDYRGMSKLKSTYTDKLPRMINAETGRVHTNYAQAVAVTGRLASSDP
NLQNIPVKTEEGRRIREAFIAPAGSYIVSADYSQIELRIMAHLSEDSSLLKAFHDGQDVH
RATASELFDITPLEVNPEQRRYAKVINFGLIYGMSAFGVASNLGISRTDAKNYIDRYFQR
YPGVAQYMDNIRTMAREQGYVETVFGRRLWLPEINSPNGPRRQAAERAAINAPMQGTAAD
IIKLSMIEVENWLENEQLESKLIMQVHDELVLEVPDKELDIVRKKLPELMGSVARLKVPL
IAEVGFGKNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacttttattattagtcgatggatccagttacctttatcgcgcctatcatgcc
ttgccggatttgcgcaatgccgaaggcgaaccgactggagccatctatggtttcctgaat
atgctgcaccgtttgcagaaggattatcccacagcctacgttgcctgtatattcgacgca
aaaggcaagactttccgtaatgatctttatcaggaatacaaggcaaaccgttctgccatg
cccgacgatctggtcaaacagaccgcacccatccatgaattggtcagaatgctcggctgg
ccggttttgtctgtcgagggtatcgaggcagacgatgtcataggaacccttgtcaccatc
gccggcaaagaaggatttgatattgtcgtttcgacaggtgacaaggatatgtcccagctg
gtaaaagatcatgtcatgctggtcaataccatgaacaacgaagtgatggatacggaagga
gtcatcaggaaattcggtgttcctccggaacggataattgattacctctctttgatcggc
gatacatcggacaatattccaggcgtcagtaaagtaggtccgaaaacggctgtcaaatgg
ctcgctcaatacggttccctggatggtgtcatcgaaaatgcgggcacgatcaaaggaaca
gccggcgataatctgcgcaagtctctcgattggcttccccaggcaagaaaactgataacc
atccggacagattgcgatttgagcggtcaattcaagtcaatcaatgaaacgctcgtcaaa
aaacccgaagatattgccggtttgagaaaagcctatgaacgttatggattcaaaagctgg
ttaagggaactgaacgctacttcccaggaaaaaaacgacgacaagaaccagtttggatta
ttcaatgaacctgctttccagcaaggtgaatttgtcggaaaacaaaaatatgaaacggta
ctgaccgaaaaacagcttgataactggcttcgtaaaatcgatcgggccgaactgacttcg
ttggacacggaaacgacttccctggattccatgaaagccagattggtcggaatttccctt
tccgtcgaaccaggtcttgcggcctatattccgctcgcccaccgtacgattgaacctgtc
gaacaattgcccgttgattatgttctgggaaaactgaaaaactggcttgaaaatccctgc
aaaaagaaagttggccagaatctgaaatatgactgtcatattttcgccaattacgacatt
cacctccaggggatcgagcatgatactttgcttgaatcctatgtactggaatcgcacagg
cgtcatgatatggacagcctgtctgagcggttactcgaacataaaccgatcagctatgaa
gaaatttgtggcaaaggcgcttcacaaatcggtttcgatcagattgaactggattgcgca
acagaatatgcggcggaggatgctgacgttacactacagctccacaaaaaaatgtggcca
caaatcgaaaaaaacgagggattacgtttcatttacgaaaaaatcgaaataccgactctc
gttgtcttgcaaaaaatggagcgtaatggtgtccttattgatccagaacgtcttttagga
caatcttcggaactcggaaccaaaatggacgaactggaaaaaagcgcatatcgggccgca
gaacaggcattcaacctgaattcaccgaaacagctggctgaaattctttttgacaaactg
ggacttccaatgatcaaaaagacaccgtccggtgcgccttccaccagtgaagaagttctt
gaaaaactgtcgcttgattatcccttgccaaaaattattctggattatcgtggcatgtcg
aaactgaaatcgacttatacagacaagctgcccagaatgatcaatgccgaaacaggaaga
gttcataccaactatgcgcaagcagttgccgtcaccggacgtctggcatccagcgatccc
aatctccagaacattccggtaaaaacagaagagggaagaagaatcagggaagctttcatc
gccccggcgggaagttatattgtctcagccgattattcccagatcgaactgagaatcatg
gctcatctgtcggaagattcaagcctgctcaaggcttttcacgacggacaggatgtccat
cgtgcaacagcatcggaactgttcgacatcactcctttggaagtcaatccggaacagaga
cgttacgccaaagtcatcaatttcggcctgatctatggcatgagcgctttcggcgttgca
tccaatctgggaatcagccgaaccgatgcaaaaaattacatcgaccgttattttcagcgc
tatccgggtgtcgcacaatatatggacaacatccgcacaatggccagagaacagggatat
gttgaaaccgttttcggcagaagactctggcttcctgaaatcaattcaccaaacggcccc
cgtcgtcaggcagcagaacgggcggctatcaatgctcctatgcagggaacggcggcagac
atcatcaaactatcgatgatcgaagtggaaaactggctggaaaacgaacagcttgaatcg
aaactgatcatgcaggttcatgatgagctggttctggaagttcctgataaggaactggat
attgtcagaaaaaaattgccggaactgatgggaagtgttgcccgattaaaagtaccgttg
attgcggaagtcggattcgggaaaaactgggatgaagcacactga
DBGET
integrated database retrieval system
