Oxalobacter aliiformigenes: NB647_02460
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Entry
NB647_02460 CDS
T08749
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal02024
Quorum sensing
oal03060
Protein export
oal03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NB647_02460 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NB647_02460 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NB647_02460 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
oal02044
]
NB647_02460 (ffh)
Enzymes [BR:
oal01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NB647_02460 (ffh)
Secretion system [BR:
oal02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NB647_02460 (ffh)
Eukaryotic Sec-SRP protein
NB647_02460 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
YqeC
AAA_22
AAA_31
6PF2K
AAA_16
AAA_33
AAA_24
nSTAND3
ArsA_ATPase
AAA_30
AAA_14
T2SSE
GTP_EFTU
APS_kinase
AAA_19
KTI12
ResIII
ATP_bind_1
AAA_18
NACHT
NTPase_1
AAA
TsaE
Motif
Other DBs
NCBI-ProteinID:
WAV89698
LinkDB
All DBs
Position
518915..520282
Genome browser
AA seq
455 aa
AA seq
DB search
MLDNLTQRLAKVVKTIRGEARLTEANTAEMLREVRLALLEADVALPVVRNFIGKVREKAM
GKEVMDSLSPGQALVGVVQQELASIMGADLGEKASQLNFSTQPPAIILMAGLQGVGKTTT
VGKLARYLRQDKKKKVLTVSTDVYRPAAIKQLEMVSGQSGADFFRTESSEQPIAIAQAAL
DYAKRHFYDVLIVDTAGRLGIDEQMMQEISGLHQALSPIETLFVVDAMLGQDAINVAKSF
NDALPLTGIVLTKLDGDARGGAALSVRHITGKPVKFVGVSEKLDGLEAFDPVRMANRILG
MGDILALVEEARKNVDLKAAKELEKKLKVGGRFDLNDFKAQLEQMNNMGGLSGMLDKMPA
QFRLAAQGANMEQANKHVGRMAGIINSMTPQERAKPELIKASRKRRIAAGAGVQVQEVNR
LLSQFEQVQSMMKKIKNGGMMKLMRGLKGMMPGMR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataacctgactcaacgtttagccaaagtcgtcaaaacgatacgtggtgaagcc
cggttaaccgaggccaatacggcagaaatgcttcgggaagtccgtcttgctttactggaa
gccgatgtcgctttgcccgttgtcagaaattttatcgggaaagttcgtgaaaaggcgatg
ggaaaggaagtaatggattccctgtcgcccgggcaggcgctggttggtgtcgtccagcag
gaactggccagtatcatgggagcggatctgggggaaaaggcttcccagctcaatttttct
acccagccgccggcgattattcttatggccggtttgcaaggggtcggcaagaccacgaca
gtgggtaaactggccagatatctccggcaggacaagaaaaagaaagtactgacggtttcg
accgacgtttatcgtccggccgctatcaaacagcttgagatggtttccggccaaagtggc
gccgattttttcaggacagaatcttccgagcagcccatagcgattgctcaggccgctctg
gattatgccaaaagacatttttacgacgtactgattgtcgatacagcgggacgtctgggt
attgatgaacagatgatgcaggaaatatccggtctgcatcaggcgctttctccgatcgag
acactttttgtcgttgatgcgatgctgggacaggatgcgattaatgttgccaagagtttt
aatgatgccttgcctctgaccgggattgtcctgaccaaactggatggcgatgcgcgcggc
ggcgctgccctgtctgtgcggcatattaccggaaaaccggtcaagttcgtcggtgtttca
gaaaaactggatggtcttgaggcgttcgatcctgtccggatggcaaaccggatactgggt
atgggagatatcctggctctggtggaagaagcccgcaagaatgtcgatctcaaagctgcc
aaggaacttgagaaaaaactgaaagtcggtggacgttttgatctgaacgatttcaaggcc
cagctggagcaaatgaacaacatgggaggactttccggcatgcttgacaaaatgcctgcc
caattccggctggcggcgcagggagccaatatggaacaggccaataaacatgtcggtcgt
atggccggcatcattaattcgatgactccgcaggaacgcgcaaagccggaattgatcaag
gcttccagaaaacgtcgtatagcggcgggcgccggtgttcaggtccaggaagtgaaccgg
ttgctttcccagttcgagcaggtgcagtccatgatgaagaaaataaaaaacggcggtatg
atgaaattgatgcgtggtctcaagggaatgatgcccggtatgcggtaa
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