Oxalobacter aliiformigenes: NB647_02555
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Entry
NB647_02555 CDS
T08749
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NB647_02555 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oal03019
]
NB647_02555 (pcnB)
Enzymes [BR:
oal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NB647_02555 (pcnB)
Messenger RNA biogenesis [BR:
oal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NB647_02555 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WAV89716
LinkDB
All DBs
Position
complement(537510..538895)
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AA seq
461 aa
AA seq
DB search
MINKLIRKIFGIGSNPRPIQKPVTLSPQQHGIDPRLVSNSAVRVVRILQNAGYDAYIVGG
AVRDLLLGLEPKDFDVATNATPEQVRRLFRRAFLIGRRFQIVHVLLGQDLIEVTTFRGSS
TKPALKDEAGRLLRDNNFGTQEEDAARRDFTINAMYYNPANQLLLDYHGGMDDLKNRTLK
IIGDPEQRYREDPVRMLRIVRFAAKLGFSIDQATCAPIASLAPLINNVPSARLFDEMLKL
LMCGHAMSCLKELRTRGLHKGLLPLLDVALEQPQAAHFIEIALGKTDQRIRQNKRISPGF
LFAALLWTQVEEKWAQYRSDGEYPIPALVAAASDILDAQTEKLAIQRRIASDMKDIWLMQ
PRLERRTGKSPYRLLENERFRAAYDFLLIRCEAGELDPETGQWWTKFIDASAEERQQMID
EQMRLAPRTSSGRKRAKRSRRRHKTDAGPAISLQTAENIHS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgattaacaaactgatccgtaaaattttcgggataggatcaaatccccgtcccatccag
aaacctgttaccttaagccctcaacagcatggaattgatccgcgactggtttccaatagc
gctgtacgggttgtacgtattctgcaaaatgccggatatgatgcctatattgtcggcggt
gcagtacgtgaccttctgctcggactcgaaccgaaagatttcgatgtcgcgaccaatgcg
acaccagagcaggtcaggcgtctcttcagacgtgcttttcttattggcagacgcttccag
atcgtccatgtccttctcggccaggatctgattgaagtcaccaccttcagaggatcctcc
accaaaccggcattgaaagatgaagcgggcaggttactccgggacaacaatttcgggaca
caggaagaagatgccgcccgaagggacttcaccatcaacgccatgtattacaacccggcg
aaccagttgctcctggattaccacggaggcatggacgaccttaaaaaccgtactctcaaa
atcatcggagaccctgaacaacgctatcgtgaagatcccgttcgcatgttacggatcgtc
cgtttcgccgcaaaactgggattttcaatagaccaggcgacatgtgctccgatcgcttca
ctggctcctcttatcaataacgtcccgtcagcccgtctttttgatgaaatgctcaaattg
ctgatgtgcggacacgccatgtcatgcctgaaagaactgcgaaccagaggtttgcacaaa
ggcttgcttcccttgctggatgttgcccttgaacaaccgcaagcggctcatttcatcgaa
atagccctcggcaaaaccgatcagcgaatcagacaaaacaaacgtatttctccgggattt
ctgttcgccgcattgctttggacccaggtcgaggaaaaatgggcgcaataccgttctgac
ggtgaatatcctatcccggcacttgttgccgctgcgagcgacattctggatgcccaaact
gaaaaactggccatacagcgccggatcgccagcgacatgaaagatatctggctcatgcaa
ccccgactggaaagacgtacgggcaaatctccctaccgtctgcttgaaaatgaacggttc
cgggcggcatacgattttctgctgatccgctgcgaagctggcgagcttgatcccgaaaca
ggccaatggtggaccaaattcattgatgcatccgccgaggaacgccagcaaatgatcgac
gaacaaatgagactggcccccagaacttcttcaggaagaaaacgggcaaaacgttcccgt
cgtcgtcacaagacggatgcaggtccggcgatatcattacaaacggcagaaaacatccac
tcctga
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