Oxalobacter aliiformigenes: NB647_04080
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Entry
NB647_04080 CDS
T08749
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal00300
Lysine biosynthesis
oal01100
Metabolic pathways
oal01120
Microbial metabolism in diverse environments
oal01230
Biosynthesis of amino acids
Module
oal_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NB647_04080 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oal01002
]
NB647_04080 (dapE)
Enzymes [BR:
oal01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NB647_04080 (dapE)
Peptidases and inhibitors [BR:
oal01002
]
Metallo peptidases
Family M20
NB647_04080 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WAV89977
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All DBs
Position
complement(871507..872634)
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AA seq
375 aa
AA seq
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MNPTFRLACDLIAQASVTPDDRQCQQIIRSLLAAAGFECETIRSGEVTNLWARHGTRGPL
LVFAGHTDVVPSGPVEKWTSDPFTPTVRNGRLYGRGAADMKTSVAAMVIAARDFIHAHPD
YHGSIGFIITSDEEGTATDGTDVVVKTLEKRGIRPDYCIVGEPSSLNRLGDTIKNGRRGS
LCGQLTVFGKQGHIAYPKRAINPIHLAAPALAELAAEVWDNGNEYYEPTSWQISNIHAGT
GANNVIPGELFVEFNFRFCTASTVKDLKKRVHAILDRHGLNYRLDWNYSGVPFLTPRGSL
CDALSGAIRDVTGVTPELSTTGGTSDGRFIARICPQVVEFGPITESIHQIDENTLLADIE
PLTAIYRRTLENLFL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgactttccgtctggcctgcgacctgatcgcgcaggcctccgtcacaccggac
gacaggcaatgccagcagatcatccggtccctgctggccgccgccggcttcgaatgcgaa
acgatccgttccggcgaagtaaccaacctctgggcacggcacggtacccgggggcccctg
ctcgtcttcgccggccacaccgacgtcgtgccgtccggccccgttgaaaaatggacgtcc
gatccgttcacacctaccgtacggaacggccgcctttacggacggggtgcggccgacatg
aaaacctcggttgccgccatggtcatcgccgcccgcgatttcatccatgcccatccggac
tatcacggttccatcggcttcatcatcaccagcgatgaagaaggcacagcgactgacggt
accgatgtcgttgtgaaaacgctggaaaaacgcgggatccgtcccgactattgcattgtc
ggcgaaccgagttccctaaacagactgggcgatacgatcaagaacggacgccgcggttcc
ctctgcggccagctgaccgtcttcggcaaacagggacacatcgcctatccgaaacgggcc
atcaacccgatccatctggcagcacccgcactggccgaactggccgccgaagtctgggac
aacggcaatgaatactacgaaccgacttcgtggcagatctccaacatccatgccggaaca
ggcgccaacaatgtcataccgggcgaactcttcgtcgagttcaacttccggttctgcacg
gccagcacggtaaaagacctgaaaaaacgggttcatgccattctggacagacatggcctg
aattaccggctcgactggaactattccggcgtgccgttcctgacgccgcgaggttccctc
tgcgacgccctctccggcgccatccgggacgtaaccggcgtcacaccggaactttccacg
acaggcggaacgtccgacggccgtttcatcgcccgtatctgtccacaggtcgtcgaattc
ggcccgataaccgaaagcatccaccagatcgacgaaaacacacttctcgccgatatcgaa
ccgctgaccgccatataccggcgtacactggaaaacctcttcctgtaa
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