Oxalobacter aliiformigenes: NB647_04525
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Entry
NB647_04525 CDS
T08749
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
oal
Oxalobacter aliiformigenes
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oal03000
]
NB647_04525
Transcription factors [BR:
oal03000
]
Prokaryotic type
Helix-turn-helix
Other families
NB647_04525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
AAA_5
Mg_chelatase
AAA
HTH_8
AAA_2
GAF_3
AAA_3
AAA_7
AAA_16
AAA_19
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WAV90062
LinkDB
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Position
complement(970086..971732)
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AA seq
548 aa
AA seq
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MTAFDYRHGGLCNTVDRHEHDYFHFLVDLTDAVIATRDIPSLAEKTADYLHAFFGLDFIS
LETVESSTFRLNAHSFAFDRQNRRTCNCYSKSLHATLLGTALRNHEKILFNRKAMLEHAG
KYPFIDTLVKKGLQVLLHLPLVSAGELLGALAIGSVRHSHFTPDVMELLNRVSSMLAMAI
DVILLHGNGNSCSALPLPADSSPVEQDASLHPHNIIGNSPAIQSILRQIEIVAPCNATVL
LQGETGTGKGLVAQTIHDLSERNMHEMVKMNCTAIPSELMESELFGHEKGAFTGALNRRI
GHFEQADKSTLFLDEIGDMPLDLQPKLLSVLQEHQIRRLGSVVTLPVDVRFIAATNCNLA
QKIEDKTFRSDLFYRLNVFPITIPPLRERAEDIPLLARFFVRKYARQMNRHITTIPEPIL
DMMSRLPWPGNIRELENVMERAVILTGNSTVLNLTPESLSGFTTRTFPVTVQTPEPIRIP
APVIPQTDRNAIIRALRETGGQIGGKSGAAARLGLKRTTLLARIKRLGIAVDDFREKEEM
PSTVTETA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgattaccgtcatggtggtctctgcaatacagtggaccgtcatgaacac
gattattttcattttctggtcgatctgacagacgctgttatcgccaccagagatatcccc
tccctggccgaaaaaacagccgattacctgcacgcctttttcgggctggatttcatcagt
ctcgaaaccgtggaatcctcgaccttcagactgaatgcccattcctttgcattcgaccgc
cagaaccggcggacatgcaactgctacagcaaatcgttgcatgccaccctgctgggaacc
gccctgcgcaaccatgaaaaaatcctgtttaaccgcaaggcgatgctcgaacacgccgga
aaatatcctttcatcgacactctggtgaaaaaaggccttcaggtcctgctccacctcccg
ctggtatcggcaggagaactgctgggagcactcgccatcggcagcgtcaggcattcgcat
ttcactcctgatgtcatggaactgctaaaccgtgtcagcagcatgctggccatggcgatc
gacgtcatcctgctgcacgggaacggcaattcctgttccgcgctcccgctaccggcggat
tcttctcctgtggagcaggatgcctccttgcatccccacaacatcatcggcaacagtcct
gccatccaatccattctccgccagatcgaaatcgttgcaccatgtaatgccaccgtattg
cttcagggagaaacgggaaccggcaagggactcgtggcacaaaccatccacgacctttcc
gaaagaaacatgcatgaaatggtcaagatgaactgtacggccattccgtccgaactgatg
gaaagcgaactgttcggccatgaaaaaggcgccttcaccggagcgttgaaccggcggatc
ggtcacttcgaacaggcagacaaaagcaccctgttcctcgatgaaatcggcgatatgccg
ctggatctccagccgaagctgttaagtgttttgcaggaacaccagatccggcgactggga
agtgtcgtcactcttccggtcgatgtccgctttatcgccgcgacgaactgcaatctcgcc
cagaagatcgaggacaagacattccgcagcgacctgttctaccggctgaacgtctttccg
atcaccattccgccccttcgtgaacgggcggaagacatccccctgctggcgagattcttc
gtccgcaaatatgcccgccagatgaaccggcacatcacgaccatccctgaaccgatactg
gacatgatgagccggctgccctggcccggcaatatacgcgaactggaaaacgtcatggaa
cgggcggtgattctgaccggcaacagtacggtgttaaatctcactcccgaatcgctgtcc
ggtttcacgacccgtacttttccggtcaccgtccaaacaccggaacccattcgcattccc
gccccggtcataccgcagacggacagaaacgcgatcatccgggcacttcgcgaaaccgga
ggacagatcggcggcaagtccggcgccgccgcccggcttgggctgaaacggacgacattg
ctggcgcgtatcaagcgtttgggtatcgccgtcgacgatttccgtgaaaaagaggaaatg
ccgtccaccgtcacggaaaccgcctga
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