Oxalobacter aliiformigenes: NB647_06310
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Entry
NB647_06310 CDS
T08749
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NB647_06310 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oal03400
]
NB647_06310 (recC)
Enzymes [BR:
oal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NB647_06310 (recC)
DNA repair and recombination proteins [BR:
oal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NB647_06310 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WAV88513
LinkDB
All DBs
Position
complement(1359447..1362797)
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AA seq
1116 aa
AA seq
DB search
MLNLNQSNRFEVLLQMLCENLAERPASVFTPDQVIVPSAAVKRKLMLAIADMYGVCANVT
FPFLAQWLWQQIGSLVEVGETSPFSSSVLSWRILRFLEEPGFAKAYPRLAAYLARCDDVM
RFDLACRVAALFERYVLYRPEWLEVWAGGEMADIVRHDHPRQAAARDDQAWQAALWRKIA
EETGTLERDPVARFFSILDQDGEKAAARLPKRVHLFCEPSVAPQYIEMLRRLGKWVDIEL
YVINPCREYWFEIVDSRRLAWLANRQQDLYHETGNRLLASWGKQNRATLDLMLTQLEPFG
RENDGFVSTAQAGQPETVLSHIQDAILDLAEPEPGSLSHLGEDGSMEIHVAHSLMREIEI
LHDQLLRRFASEDSPDPSDVLVVMPDLDEAAPMIEAVFSHSGSGTRIPYVITGRRNSRIN
PVAHALLDVLSLASSRFSATGVMDVLMLPEIGTTFGFGDDLKTLRRWLDDAGICWALDGS
HKEEFDLPPDDSHTFHDGLHRLFLAYALPDRKRLPVDGRLPAGHASGSRSAALGQLWRFV
EAVRQLKRDLSPARTPAGWMQCWCDVLDTFVTVTPETLDADREVRSRIARLHEIMAEASD
TFETGFAIARHALERALEGAGEGSVPAGAVTFAPMDSLRGLPFDHVFAIGLNDGIYPADV
RPEEFDLIQLAPRKNDRLLRDTDRNVFLDLVLSARKSLYLGYSGKNIRDNSVRPPSVLIA
ELLDVLVPAMAESPDEKSLKTAYDRLVTEHPLQPFSAAYFNGKGGERLASFRSDLCAALN
AGIGKIQSKKEVASKIPEKGFDNENDGDERIIHAGLPFFTKALHAPDESWRQVLLDDLIR
FFRHPARYLLQRRLGIGFQGTEEDLPADEPFVVDRSARRKLADRLLPLYLENISPGRIGK
AALAGNEFPSGHLGTDRLKSELMALGAYARSLSADLESGLAGPVGRTLEFDFEGEYWRLS
GTLTGLRENGLVRYRYDNGSPWDFLDGWIRHLFLNACRPEGILCRSVWHFRDEKTELGPV
EDAEERLRDLVAIYRTGLCRPLHFFPRPAWEYISNGHRLDKAADMWRESNDGENDVFNRL
AMRGVDNPVDGEFADLAGRVFGPFFAHKTGETHEGE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacctgaaccagtccaaccgttttgaagtcctgttgcagatgctttgcgaaaat
ctggcagagcgtccggcttccgttttcacgccggatcaggtgattgtgcccagcgccgcc
gtgaaacggaaactgatgctggccattgccgatatgtatggtgtgtgcgccaatgtgaca
ttcccgtttctggcgcaatggctctggcagcagatcggatcgctggtcgaggtcggcgag
acgtcgcctttttcttcctctgtcctgtcctggcggatcctgcggtttctcgaggaaccc
ggttttgcaaaggcatatccgagactggcggcgtatctcgcacgctgtgacgacgtcatg
cgtttcgatctcgcttgccgggtggcggcgcttttcgagcgatatgtgctttaccggccg
gaatggctggaagtctgggctggcggggaaatggccgatattgtccggcatgaccatccg
agacaggcggcggcacgggacgatcaggcctggcaggctgccttgtggcggaaaatcgcg
gaagaaaccggaacgctcgagcgcgatcctgtcgcacgttttttctcgatactggatcag
gacggcgaaaaggcggcggcccgcttgccgaagcgggtgcaccttttttgtgaaccgtcc
gtcgcgccgcagtatatcgaaatgcttcgccgactgggcaagtgggtggatattgaactg
tatgtcatcaatccgtgcagggaatactggttcgagatcgtcgacagcagacggctggcg
tggctggccaaccgccagcaggatctttatcacgaaaccggcaaccgcctgctcgcttcc
tggggaaaacagaaccgtgccacgctcgatctgatgctgacgcaactggaaccgttcggg
cgggaaaacgacggcttcgtttccactgcacaagccgggcagcctgaaacggttctctcg
catatacaggatgccattctggatctggcggaaccggaacccggttccctgtcgcatctc
ggggaagacggcagtatggaaatccatgtggcacattcgctgatgcgggaaatcgaaatc
ctgcacgaccagctgttgaggcgcttcgcttcggaagattctcccgatccttcggatgtt
ctggtcgtgatgcccgatctggatgaagcggctccgatgatcgaggcggttttcagccac
agcggttcgggtacgcgcattccttatgtcattaccggtcgccggaacagccgtatcaac
ccggtggcacatgccctgctcgatgtactgtcgctggcgtcttcccgtttttcggcgacc
ggggtgatggatgtgctgatgctgccggaaatcggcaccacgttcggtttcggcgacgat
ctgaaaacgcttcgccgctggctggacgatgccggtatctgctgggcactggacggttcc
cacaaggaggaattcgatctgccgccagacgacagccacacttttcatgacgggctgcac
aggttgtttctggcctacgcgctgcctgacaggaaacggttgccggtcgatggccgcttg
ccggcgggacatgcttcgggttcccgttcggccgctctgggccagctgtggcggtttgtc
gaagccgtccggcaactgaaacgcgatctgtctccggccagaacgcctgctggctggatg
cagtgctggtgcgatgtgctggatactttcgtgacggtgacgcctgagacgctggatgcc
gaccgggaagtccgctcgcggatcgccagactgcatgagatcatggcggaagcgtccgat
acgttcgaaacggggtttgctatcgcccgccatgcactggaacgggcgctggaaggcgcg
ggggaaggaagcgttccggctggcgccgtgacattcgcgccgatggacagtctgcgcggt
ttgccctttgatcatgtattcgcgatcgggctgaacgacgggatttatccggccgacgtg
cggccggaagaattcgatctgatccagctggcgccccgcaaaaacgaccggttgctgcgc
gatacggacaggaacgtgtttctcgatctggtactgtcggcacgcaagagtctgtatctg
ggatattcgggaaaaaacatccgggacaattccgtcaggccgccttcggtgctgatcgcc
gaattgctggatgttctggttcccgcgatggcggaaagtcccgatgagaaaagcctgaaa
acagcgtacgaccgtctggtcaccgaacatccgctccagccgttttcggccgcttacttc
aatggaaaaggtggggaacggctggccagtttccgttccgatctgtgtgcggccttaaat
gccggtatcggaaaaatccagtcaaaaaaggaagttgcgtcgaaaatcccggaaaaaggt
ttcgataatgaaaacgacggggatgagagaatcatccatgccgggctaccgtttttcacg
aaagcgcttcatgcgccggatgaatcctggcgacaggttttactggacgatctgatccgt
tttttccgccaccctgcccgctatctgttacagcgacggctcggaatcggttttcaggga
acggaggaggacttgccggcggatgaaccttttgtcgtggaccggagtgcacggcgcaag
ctggccgaccggcttttgccgctgtatctggaaaacatctctcccggcaggatcgggaaa
gcggcgctggcgggcaacgagtttccgtcaggacatctggggacggaccgcctgaaaagc
gaactgatggcactgggtgcctatgcacgcagtctgtcggccgatctggaaagcggactg
gccgggccggtcggccggacactggaattcgatttcgaaggggaatactggcgattgtca
ggcaccctgaccggcttgcgggaaaacggactcgtccggtaccggtacgacaacggttct
ccctgggattttctggacggatggatccggcacctgtttctgaatgcgtgccggcctgag
gggattctctgtcgttccgtctggcatttccgggatgaaaaaaccgaactggggccggtt
gaagatgctgaggaacggttgcgtgatctggtggcgatctaccggacggggctttgccgg
cccttgcatttttttccacgtccggcatgggaatatatcagtaacggccatcgtctggac
aaggcggcagatatgtggcgggaatcgaacgatggcgaaaacgatgtgttcaaccgtctg
gcgatgagaggtgtggacaatccggttgacggggaattcgccgatctggccggacgggtt
ttcgggccgtttttcgcgcataaaacaggagaaacgcatgaaggagaatga
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