Oxalobacter aliiformigenes: NB647_07630
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Entry
NB647_07630 CDS
T08749
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NB647_07630 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oal03400
]
NB647_07630 (uvrB)
DNA repair and recombination proteins [BR:
oal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NB647_07630 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NB647_07630 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
UvrD-helicase
AAA_22
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
WAV88748
LinkDB
All DBs
Position
complement(1650207..1652306)
Genome browser
AA seq
699 aa
AA seq
DB search
MSHLSLISSKKDDGKVVTFQNSPFELHQPFPPSGDQPEAIDRLVEGIEDGLSYQTLLGVT
GSGKTYTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPNNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSAINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL
RTRDRIPQRDVITRLVQMQYSRNDIEFSRGMFRVRGDTIDVFPAENADYALRIEMFDDEI
ESLHFFDPLTGKVLQKIPRFTIYPGSHYVTPRETVLRAIETIKEELRERKEWFRKNGKFV
EEQRIDQRTRFDLEMMHELGFTKGIENYSRHLTGMKPGEPPPTLVDYLPSDALMFLDESH
VMIGQLNGMYNGDRSRKTNLVDYGFRLPSALDNRPLRFDEFESKMRQTVFVSATPASYEL
THSGQVVEQLVRPTGLVDPAIQVRPASTQVDDLLAEIHDRVEKSERVLVTTLTKRMAEQL
TEFLTENGIRVRYLHSDIDTVERVEIVRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRSERSLIQTIGRAARNLNGAAILYADTMTDSMKRAIDETERRRAKQLAYNEQH
HITPAGIMKEIRDLIDGVFHPQDSLQESHVSDEQAQYDVMSEKELSREIKKLEKQMMEYA
KNLEFEKAAKARDQLHILRERAFGAAVIDRIRMESAKKK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttatcgcttatttcttcaaaaaaagatgacggaaaagtcgtgactttccag
aattcgccttttgaattgcatcagcctttcccaccgtcgggcgatcagcctgaagccatt
gaccggctggtagaaggaattgaagacggtttgtcataccagacgttgctgggcgtcacc
ggttccggcaaaacctatacgatggccaatgtcatagcgcggttggggcggcctgccatt
gttttcgcaccgaacaagacgctggcggcacagttgtacagtgagttcagggagtttttt
ccgaacaatgcggtggagtatttcgtcagttattacgattactatcagccggaagcctat
gtacctcaaagggatctgttcatcgaaaaggattccgccattaacgagcatatcgagcag
atgcgcctgtcgtgcacgaagtcgctgatggaacggcgtgatgtcgtgattgtggcgaca
gtatcggccatatacggtatcggcaatccgaatgagtatcatcagatgattctgacgttg
cgtacacgtgacagaataccccagcgggatgtgattacccgtctggtacaaatgcagtac
agccgtaacgatatcgaattcagtcgcggaatgtttcgtgtcaggggggatacgattgat
gtttttccggctgaaaatgccgattatgcccttcgtatcgaaatgttcgatgatgaaatc
gaaagtcttcatttctttgatcccttgaccgggaaggttttgcagaaaattccgcgtttc
acgatttatcccggttcgcattatgtgacgccgagagaaaccgtgttgagagcgatcgaa
acgatcaaggaagagctcagggagagaaaggaatggttccggaaaaacggcaagttcgtc
gaggaacagcgtattgaccagagaacccgtttcgatctggaaatgatgcatgagttgggt
ttcacaaaggggatcgaaaattattcccgccatttgaccggtatgaaaccgggtgaacca
cctccgaccctggttgactatctgcccagtgatgccctgatgtttctggatgagtcccat
gtcatgatcggccagttgaacgggatgtacaacggcgaccgttcccgcaagacgaatctg
gtggattacggtttcaggttgccttccgcgctggacaaccgtccgttgcgctttgacgag
tttgaaagcaagatgcgccagacggttttcgtgtctgccacacctgccagttatgaattg
acccattccggacaggtcgtcgagcagcttgttcgcccgaccggactggtagatcctgcc
atacaggtcaggccggccagtacacaggtggatgatctgctggccgaaattcacgaccgg
gttgaaaaaagcgaacgggtgctggtgacaacgctgaccaaacgtatggcggaacagctg
acggaatttctgacggagaacggaatccgggtccgttatcttcacagcgatatcgatacg
gttgaacgggtggaaatcgtccgggatttgcgtctggggacgtttgatgtactggtcggt
atcaatctgcttcgggaagggctggatattccggaggtatctctggtcgctattctggat
gcggacaaggaaggttttctgcgttccgaacgcagtctgatccagacgatcgggcgtgcg
gcacgcaatctgaatggcgccgcgatactgtatgccgataccatgaccgattcaatgaaa
cgggcgatcgacgaaacggaacggcgccgcgcgaaacagctggcttacaatgaacagcac
catattacgccggccggtatcatgaaagaaatcagggatctgatcgatggggtttttcat
ccgcaggacagtttgcaagaatcgcatgtgtcggatgaacaggcccaatatgatgtcatg
tcggaaaaagaattgagccgcgagatcaagaaacttgaaaaacagatgatggaatatgcc
aaaaatctggaattcgagaaggcggctaaagcgcgggatcagttgcatattttgagggaa
agggcattcggtgccgctgtgatagaccggatacgtatggagtcggcaaagaaaaaatga
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