Oxalobacter aliiformigenes: NB647_08710
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Entry
NB647_08710 CDS
T08749
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NB647_08710 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oal03400
]
NB647_08710 (xth)
Enzymes [BR:
oal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NB647_08710 (xth)
DNA repair and recombination proteins [BR:
oal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NB647_08710 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Ig_2_Mok13
Motif
Other DBs
NCBI-ProteinID:
WAV88945
LinkDB
All DBs
Position
1899280..1900047
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AA seq
255 aa
AA seq
DB search
MKIATWNVNSLKVRLLQVLQWLKDNPVDILCLQETKLTDEKFPLTEIEAAGYQAVFTGQK
TYNGVAILAKETASDIVRNNPLFPDEQQRIVAATFGKIRIVCAYVPNGQSVGSDKYRYKI
EWLRALRNWLEEEKKKYPYLALLGDYNIAPEDRDVYDPVAWAGNVLVSELERVAFRALLD
IGLVDAFRLFEQPEKSYSWWDYRQLAFPRNRGLRLDHILLSGKLASLCSACTIDRQPRKW
KQPSDHTPVIAELDL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcaacctggaacgtcaattcactgaaagttcgccttttgcaggttctccag
tggttaaaagacaatccggtcgatatcctctgcctgcaggaaacgaaactgacagacgag
aaatttcccttgacggaaattgaagcggccggttaccaggctgtttttaccggtcagaaa
acttacaacggagtcgccattcttgcaaaagaaacggcatccgacatcgtcaggaacaat
ccgctttttccggacgagcagcagcgtatcgtcgcagccacattcggaaaaatacgcatc
gtctgtgcctatgttccaaacggccagtcggtcggatcagacaaataccggtacaaaatc
gaatggctcagggcattgcgtaactggctggaagaagaaaagaaaaaatatccgtatctc
gcgctcctgggagattacaacatcgcgccggaagatcgggatgtttacgatccggttgca
tgggctggaaatgtacttgtttccgaactggagcgtgtcgcctttcgcgccttgctcgat
atcggcctcgtcgatgccttccgtctctttgaacaacctgaaaaatcctacagctggtgg
gattaccggcaactggcttttccacgcaatcgcggattgcggctggatcacattttgctt
tccggaaaactggcctctctgtgttcagcctgtactatcgaccgccagccccggaaatgg
aaacagccttcagaccatactcctgttatcgccgaactcgatctctga
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