Olleya aquimaris: DZC78_03370
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Entry
DZC78_03370 CDS
T05582
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
oaq
Olleya aquimaris
Pathway
oaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DZC78_03370 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaq03019
]
DZC78_03370 (rny)
Messenger RNA biogenesis [BR:
oaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DZC78_03370 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
AXO79465
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Position
complement(740345..741916)
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AA seq
523 aa
AA seq
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MDKTILIIAGVAIGAIIGFVIAKILERNNASKLIKSAKKSAGAILKEAKVEGEGIKKDKI
LQAKEKFLELKAEHEKVILSRDKKMADAEKRVRDKESQISSELSKNKKLNTEFESKVKDY
NHRLDVLDKKQDELDRLHKSQVEQLEVISSLSADEAKSQLVESLKGEAKNDAMAYVQGKM
EEAKLTAQQDAKKIIINTIQRIGTEEAVDNCVSVFNIESDDVKGRIIGREGRNIRAIEAA
TGVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARIEEVVRKTQKQIEQEI
IEVGKRTVIDLGIHGLHPELIKMVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNPK
LAKRAGLLHDIGKVPDAEADMETPHAILGMQWAEKYGEKDEVCNAIGAHHDEIEMKSLLS
PIIQVCDAISGARPGARRQVLDSYIQRLKDLEEIAFGFNGVKKAYAIQAGRELRVIVESE
KVSDQNASDLSFNISQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacaattttaattatagcaggtgttgcaattggagcaataataggctttgtt
attgcaaaaatactagagcgtaacaatgcatcaaagctaataaaaagtgcaaaaaaatct
gcaggagcaattctaaaagaagctaaagtagaaggagaaggaataaaaaaagataaaata
ttacaagctaaagagaagtttttagaacttaaagcagagcatgaaaaagtaattttatct
agagataaaaagatggctgatgccgaaaagcgtgtgcgtgacaaagaatctcaaatttca
agtgaactatcaaaaaacaagaagcttaacacagagtttgaaagtaaagttaaagactac
aatcacagacttgatgtattagataaaaagcaagacgaattagatcgactacacaaaagc
caagtagaacaattagaggttatatcaagcttatctgctgatgaagcaaaatcacaatta
gtagaatctttaaaaggagaagctaaaaatgatgctatggcttacgtccaaggtaaaatg
gaagaagctaagcttacagcacaacaggacgctaaaaaaattattataaatacaatccaa
cgtattggtacagaagaagcagtagataattgtgtgtctgtatttaatatagaaagtgat
gatgttaaaggacgtattattggtcgtgaaggtcgtaatattcgtgcaattgaagcagca
acaggagtagagattatagttgatgatactccagaagcaattatcttatcatgttttgat
tcggttagacgtgaagttgcaagattatctttacacaagttagtaacagatggtcgtatc
cacccagcacgaattgaagaagttgttagaaaaacacaaaaacaaattgaacaagaaata
attgaagttggaaaacgtacagttatagatttaggtatccatggtttgcatccagaatta
ataaaaatggttggacgtatgaaataccgttcttcatatgggcaaaatttgttacaacac
tcacgtgaagttgcaaaactttgtggtgttatggcagcagaattaggtttaaatccaaaa
ttagctaaacgcgcaggattattacacgatattggtaaagtaccagatgccgaagcagac
atggaaactccacacgctattttaggtatgcaatgggctgaaaaatatggtgaaaaggac
gaagtttgtaatgctattggtgctcaccacgatgaaatagaaatgaaatcgttattatct
ccaataatacaagtttgtgatgctatatctggagcacgtccaggagcaagacgtcaagta
ttagatagctacatacagcgtttaaaagatttagaagaaattgcttttggatttaacgga
gttaaaaaagcctatgctattcaagcaggtagagaattacgtgttattgttgaaagcgaa
aaggttagtgatcaaaatgcatctgacttgtcatttaatatttctcaaaaaatacaaaca
gatatgacttatccaggtcaggttaaagtaacagtaattagagagactagagcagtaaat
attgcgaagtaa
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