Olleya aquimaris: DZC78_04625
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Entry
DZC78_04625 CDS
T05582
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oaq
Olleya aquimaris
Pathway
oaq03420
Nucleotide excision repair
oaq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DZC78_04625
03430 Mismatch repair
DZC78_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oaq03400
]
DZC78_04625
Enzymes [BR:
oaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DZC78_04625
DNA repair and recombination proteins [BR:
oaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DZC78_04625
MMR (mismatch excision repair)
Other MMR factors
DZC78_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
RSS_P20
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AXO79700
LinkDB
All DBs
Position
complement(1019634..1021973)
Genome browser
AA seq
779 aa
AA seq
DB search
MEKYLSQLNEAQYAPTVQKEGPMIIIAGAGSGKTRVLTYRIAYLMNQGVDSFNILALTFT
NKAAKEMKGRIAEIVGASEAKNLWMGTFHSVFAKILRFEGHHLGYPSNFTIYDTQDSQKL
MGSIIREMGLDKDLYKTKQVYSRISSYKNSLITVKAYFSNPELMEADVMARRPKMGEIYK
TYVDRCFKAGAMDFDDLLLRTNELLTRFPQVLAQYQDKFRYILVDEYQDTNHSQYLIVRA
LADRFQNICVVGDDAQSIYAFRGANISNILNFQKDYDDVKMYRLEQNYRSTKNIVGAANS
VIEHNQTKLEKVVWTANDEGPKVQVHRSLTDGDEGRFVASTIWETKMNDHVPNSDFAILY
RTNSQSRAMEDALRKRDIPYRIYGGTSFYQRKEIKDVIAYLRLILNSSDEEALKRVINYP
ARGIGQTTIDRLIVAANSSGKTIYSLLKDIDSVDININNGTKNKLKDFVTLIESYQVMNQ
TANAFDLAEHVTKTSGLIKEFNKDGTPEGILRLENVEELLNGIKDFVEGQLEIADSNDNL
AEFLEDVALATDLDGDKGDPDHVALMTIHSSKGLEFSHVFVVGLEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKKAYLTYALSRYRWGKLVDSEPSRFIEEIDDQFLDIITPIEERR
INPMLSADIFGDTPPNKIRFKKAVQPKLQKKVAKKKEPVNFEISAPKKLKKASEVIPHED
ANSFGGELTVGNRVKHLKFGRGEVLKIEGKGGDVKAEIDFEFGGKKKLLLRFAKLQLIG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagtatctaagtcagttaaacgaagcacaatacgcgcctacagttcaaaaagaa
ggacctatgattattatcgcaggtgcaggatctggtaaaacacgtgtgcttacctatagg
attgcctatttaatgaatcaaggtgtggattcttttaatattttagcattaacctttacc
aataaggcagctaaagaaatgaaaggaaggattgccgaaatagttggtgctagcgaagct
aaaaacctttggatgggaacctttcactccgtttttgctaaaatccttcgttttgaaggt
catcatttaggttacccaagtaatttcactatttatgatacccaagattctcaaaaatta
atgggatctattataagagaaatgggcttggataaagatttgtataaaacaaaacaagta
tatagcaggatttcatcttacaaaaacagcttgataaccgttaaggcatattttagtaat
ccagagcttatggaagcagacgtaatggctagacgtccaaaaatgggtgaaatttataaa
acttatgtggatcgctgttttaaagcaggagcaatggattttgacgatttactgttacgt
accaatgagctgttaacacgttttcctcaagttttagcacaatatcaagataagtttaga
tacattttggtggatgagtaccaagataccaaccacagtcaatatttaatagtacgtgct
ttagcagaccgttttcaaaacatatgtgtagtaggtgatgatgcgcaaagtatttatgcc
tttagaggtgcaaatattagtaacatccttaatttccagaaggattatgacgatgtaaaa
atgtatcgtttagagcaaaattaccgttcaacaaaaaatatagttggtgcagccaactca
gtaatagagcataaccaaactaaacttgaaaaagtagtttggacagccaatgatgaggga
ccaaaagtgcaagtacatcgtagtttaacagatggtgacgaaggacgttttgtagccagt
accatttgggaaactaaaatgaatgatcacgtacctaatagtgactttgctattttgtat
cgtaccaattcacaatctcgtgcaatggaggacgcgttaagaaaacgtgatattccgtat
cgtatttatggaggtacatcgttttaccaacgtaaagaaattaaagacgttattgcatac
ctacgtttaatccttaattcttcagatgaagaagctttaaaacgtgttataaattatcca
gctcgtggtattggacaaactacaatagacagattgattgtagcagcaaatagctctggt
aaaaccatttatagccttttaaaagatattgatagcgtagatattaatattaataacgga
acaaaaaacaaattaaaagattttgtaacgcttattgagagttaccaagtcatgaatcaa
accgctaatgcttttgatttagcagagcacgttaccaaaactagtggtttaataaaagaa
tttaataaagacggaacaccagaaggtattttaagacttgaaaacgttgaagaactttta
aatggtattaaagattttgttgaaggacagctagaaatagcagactctaacgacaattta
gccgaattcctagaagatgtagcattagcaacagatttagatggagataaaggagatcct
gaccacgtcgcattaatgaccattcactcttctaaaggattagagtttagtcatgtattt
gttgttggtttagaagaagatttatttcctagtgctatgagtatgaatacacgtagtgag
ctagaagaagaacgtcgtttgttttatgtagcactaacaagagcagagaaaaaagcatat
ttaacctatgcattatcaagataccgttggggaaaattagtagattctgaacctagtcgt
tttattgaagaaattgacgatcagtttttagatattattactccaattgaagaaaggcgt
attaatccaatgttatcggcagatatttttggagatacaccaccaaacaaaattagattt
aaaaaagcagtacaacctaaattacaaaagaaagtggccaaaaagaaagaaccagtaaac
ttcgaaatcagtgcaccaaaaaaattaaaaaaagcatcagaggtaattcctcatgaagat
gctaactcatttggaggagagcttactgtagggaacagagtaaaacacctaaagtttgga
agaggtgaagtattaaaaattgaaggaaaaggaggagatgtaaaagccgaaattgatttt
gaatttggaggtaaaaagaaactattattacgttttgcaaaattacagcttataggatag
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