Olleya aquimaris: DZC78_06805
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Entry
DZC78_06805 CDS
T05582
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oaq
Olleya aquimaris
Pathway
oaq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oaq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DZC78_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaq03021
]
DZC78_06805
03400 DNA repair and recombination proteins [BR:
oaq03400
]
DZC78_06805
Enzymes [BR:
oaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DZC78_06805
Transcription machinery [BR:
oaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DZC78_06805
DNA repair and recombination proteins [BR:
oaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DZC78_06805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
AXO80110
LinkDB
All DBs
Position
complement(1461031..1462023)
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRVE
GVDHEFSAIAGVVEDMTEIILNLKQVRFKRQIEDVDNESISISISGQDKIVAGDFQKFIS
GFQVLNTDQVICNLDSKVNINMEITIERGRGYVPAEENKKASAPIGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIQTDGSISPQDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcagaagcccgacaaagtaatcatgattgattctactgatttc
gaaggtaaattcgaattcagaccattagaaccaggttacggtctaacagtaggaaatgct
ttaagaagagttttattatcttctttagaaggatttgctatcacatctgttagagtagaa
ggtgtagatcacgaattttcagcaatcgcaggtgttgttgaagatatgacagaaataatt
ttaaacttaaaacaagttcgttttaagcgtcaaatagaagatgttgacaatgagtcaatt
tctatttctatttctggtcaagacaaaattgtagcaggtgactttcagaagtttatatct
ggatttcaagttttaaatacagatcaagttatctgtaatcttgattctaaggttaacatt
aacatggaaatcactattgaaagaggaagaggttacgttcctgcagaagaaaataaaaaa
gcttcagcacctattggaacaatctttactgattcaatttacacaccaattaaaaatgtt
aagtatagcattgaaaattaccgtgtagagcaaaaaactgactacgaaaaattagttttt
gagattcaaactgatggatcaattagtcctcaagatgccttaacagaagctgctaagact
ttaatacaccactttatgttattctctgatgagcgtataacattagaggctgatgaaatt
gcacaaactgaaacttatgatgaagaatctcttcatatgagacagttacttaaaactaaa
ttagttgatatggacctatctgttcgtgctcttaattgtttaaaggctgcagaagtagat
actttaggagacttagtatctttcaataaaaatgatttaatgaagttccgtaacttcggt
aaaaaatctttaactgagctagaagaattagtaaatgttaaaggtcttaatttcggaatg
gacttatcaaaatataaactagataaagactaa
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