Olleya aquimaris: DZC78_07915
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Entry
DZC78_07915 CDS
T05582
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
oaq
Olleya aquimaris
Pathway
oaq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
oaq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DZC78_07915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaq03021
]
DZC78_07915
Transcription machinery [BR:
oaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DZC78_07915
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
DUF4665
Motif
Other DBs
NCBI-ProteinID:
AXO80312
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Position
1693687..1694550
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRESKSLDKYLQDISKLPMITAEEEVELAQKIREGCQKSLDLLTTANLR
FVVSVAKQYQNQGLTLPDLINEGNAGLVKAAKRFDETRGFKFISYAVWWIRQAILSALAE
QSRIVRLPLNKIGSINKIRKVTSHLEQINQRPPSASEIAKELDLTISDVKQSMKISSRHV
SMDAPLKEGEDYSLYDLVSSNESPNPDTNLMRESLNTEIERALETLTPRESDVIRLNFGL
SDQPAMTLDEIGRTFDLTRERVRQIREKGIRRLRQTSKSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaattaaaaattaccaagcaagttaccaatcgtgaatctaaatcactagacaaa
tacctacaagacataagtaaacttcccatgattacagcagaagaggaagttgaattagcc
caaaaaataagggaaggttgtcaaaaatcattagatttattaacgactgctaacttacga
tttgtggtttctgttgcaaaacaatatcaaaatcaaggattaacattaccagatttaata
aatgaaggtaatgctggtttagttaaagctgcaaaacgttttgacgaaactagaggattc
aaatttatatcttacgcagtttggtggattagacaagcaattttatctgctttagcagaa
caatcaagaattgtaagactaccattaaataaaattgggtcaataaacaaaataagaaaa
gtaacttctcacctagagcaaattaaccaaagaccacctagtgcgtcagaaattgcaaaa
gaattagacttaaccatcagtgatgttaagcaatctatgaaaatttctagcagacacgtg
tcaatggatgcacctttaaaagaaggagaagattacagtttatatgatttagtaagctct
aacgagtcaccaaatcctgacacaaacttaatgcgcgaatctttgaacactgaaattgaa
agagctttagaaacactaacgcctagagaaagtgacgtgattagacttaactttggatta
agcgatcaacctgctatgacactagatgaaataggtcgtacttttgatttaacacgtgag
cgtgtaagacaaattagagaaaaaggtattagacgtttacgtcaaacatctaagagtaag
atcttaaaaacgtatttaggataa
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