Olleya aquimaris: DZC78_08665
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Entry
DZC78_08665 CDS
T05582
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
oaq
Olleya aquimaris
Pathway
oaq03030
DNA replication
oaq03430
Mismatch repair
oaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DZC78_08665
03430 Mismatch repair
DZC78_08665
03440 Homologous recombination
DZC78_08665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oaq03032
]
DZC78_08665
03400 DNA repair and recombination proteins [BR:
oaq03400
]
DZC78_08665
Enzymes [BR:
oaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DZC78_08665
DNA replication proteins [BR:
oaq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DZC78_08665
DNA repair and recombination proteins [BR:
oaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DZC78_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
AXO80450
LinkDB
All DBs
Position
complement(1882877..1887268)
Genome browser
AA seq
1463 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDEMGNCIEHQDYLVQPEGFNIPY
DAEKIHGISTELAEEQGVPLAEVLEKFNIALSKTKFVVGQNVKFDLNIMGAEFVRQSVDN
PLQELPVLDTCTEDTANLCQIPGGRYGKFKLPTLTELHEYLFNQPFAEAHNATADVEATT
RCFLELIRLKKYTKEALDVQPDYFENFNKENPQTIQLIGLKHINLKKESAKIQARLQKQN
TNQVSSEEIKENIKDLQSAEFVHLHNHSQFSVLQSTIGISEMVDLAAQQNMPAVALTDHA
NMMGAFHFVKAVNGYNKSIKAKIDEAEARGESPKAKPIKGIVGCEFFVCEDHQDKTRKDN
GYQIVLIAKNKNGYHNLAKLSSHAFVNGFYYVPRIDKKLIEQYKEDLICLTGNLYGEVPS
KVLNVGESQAEEALIWWKELFQDDLYLEIMRHNQEDENRVNPTLIKFAQQHNIKLVATNN
TYYGKQEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSSEEMKALFRDIPE
AITNIQEVVDKIEGFELARDVLLPAFDIPDEFRHEEDEIDGGKRGENAFLRHITYEGAKK
RYGEELSDEVTERLDFELEVIENTGYPGYFLIVEDFIREARKMDVSVGPGRGSAAGSVVA
YCLWITNIDPLLYNLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIDKYGSNQVAQII
TYGTMAAKSSIRDTARVLDLPLFDADRIAKLIPTMSKLKKIFGLSEKELAQKFRAEDLEK
INELLNISEGSGLESETLNLARTLEGSVRNTGIHACGVIITPDDITKFVPVSLAKDSDLY
VTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKAKHDILLDPENFPLDDVKTFELFQ
RGETVGVFQYESPGMQKHLKDLKPTVFDDLIAMNALYRPGPMEYIPSFVRRKHGDEDIEY
DLPAMEEYLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKFI
EQASAKGHDAKKLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLS
NNMNDIKQVTFFMEECKRMKLSVLGPDVNESFYKFSVNKDNAVRFGMGAIKGVGHGAVMT
IVNNREEDGPYTSIFDLAKRIDLRAANKKAFENLALAGGFDELGDTHRAQYFFKDGSELT
FLEKAIKYGAKHQENENSSQVSLFGGESEVQIEEPQIPNCDTWGTMEKLSREREVVGVYI
SGHPLDDFRTEMKSFCSGTVSYFHDLAPHVNKEITFGGVVTDVQHRVSKQGKGWAMFTIE
DYTDSYEFRIFGEDYLKHRPFLLQNTFVHVKTFVRDGWVNRDTGKKSDPRLQFNSFQLLH
DVLEKNVKKLSIQLNIKELEEDKIKQLKELISMYPGNHALTFLVYDNRDKIKLTMMSRRQ
KINVTNELLNILNENQIHYLINQ
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatatttgatactgaaaccacaggattacctaaacgttgggacgcaccaatt
acggataccgacaactggccaagatgtatacaaatagcttggcaattacatgatgagatg
ggtaattgtatagaacatcaagattatttagtacaaccagaaggctttaacatcccttat
gatgccgaaaaaatacatggtatttctactgagttggcagaagaacaaggtgtgccatta
gcagaagtattagaaaaatttaatatagcacttagtaaaaccaaatttgtagtcggtcaa
aacgtaaagtttgatttaaatattatgggagccgagtttgtgcgtcaaagtgtagacaac
cctttgcaagaacttcctgttttagatacttgtacagaagatactgctaatttgtgtcaa
atacctggtggtcgttatggtaaatttaaattaccaacgttaaccgagttacatgagtat
ttatttaatcaaccttttgcagaagctcacaacgcaactgcagatgttgaggcaacaaca
cgttgttttttagagctaattcgtttaaaaaaatatactaaagaagctttagacgttcaa
ccggattatttcgaaaattttaataaagaaaatccacaaaccatccagctaataggatta
aagcatattaaccttaaaaaggaaagtgcaaaaatccaagcaagattacaaaaacaaaat
actaatcaggtctcttcagaagagattaaagagaatataaaagaccttcagtctgcagag
tttgttcatttgcataaccactcgcagttttcagtactacaatctaccattggtatttct
gaaatggtagacttagcagcacaacaaaatatgcctgctgtagccttaaccgatcatgca
aatatgatgggagcatttcattttgtgaaagcagtaaatggctataataaatctataaag
gcaaaaatagatgaagctgaagcaagaggcgaatcaccaaaagcaaaaccaattaaagga
attgtaggttgtgagttttttgtgtgtgaagaccatcaagataaaaccagaaaagacaat
gggtatcaaattgtgcttatcgcaaaaaataaaaatgggtaccataacttagctaaactg
tcatcgcatgcgtttgtgaatgggttttattatgtgcctcgtattgacaaaaaattaata
gagcaatacaaagaagacttaatctgtttaacaggaaatttatatggtgaagtaccaagt
aaagttttaaatgttggtgaaagtcaagcagaagaagctttaatatggtggaaagaatta
tttcaagacgacttgtatctagaaataatgcgtcataatcaagaagacgaaaacagggtt
aatccaaccttaataaaatttgcacagcaacacaacataaagcttgttgctacaaataac
acctattatggtaagcaggaagatgctaatgcacacgatattttattatgtgtaaaagat
ggtgaaaaacaggcgacacctataggacgtggacgtggttatcgttatggtttaccaaat
caagaatactattttaagtcttcagaagaaatgaaagccctatttagggatattcctgaa
gcaattacaaatatccaagaagtagttgacaaaattgaaggatttgagcttgcaagagat
gtattattaccagcgtttgatattccagacgagtttagacatgaagaagatgaaattgat
ggtggtaagcgtggtgaaaatgcatttttaagacatattacttacgaaggtgctaaaaaa
agatatggtgaagaactgtctgatgaagttacagagcgtctagattttgagcttgaggtt
attgagaatactggatatccaggttatttcctaattgtagaagattttattcgtgaagcc
cgaaaaatggacgtatcagttggtccaggacgtggtagtgcagcaggatctgtagttgct
tattgtttatggattactaatatagatccattactatataacttactttttgagcgtttc
ctaaatccagatcgtgtcagtatgcctgatattgatatagattttgatgacgaaggtcgt
agtcgtgttatggactatgtaattgataaatacggaagtaatcaagttgcacaaattatt
acctatggtactatggcagcaaaaagtagtattcgtgatacagcacgtgtattagattta
ccactttttgacgcagacagaatagccaagttaataccaacaatgtccaaactaaaaaag
atatttggactatcagaaaaagaattagcacaaaaatttagagctgaagatttagaaaaa
atcaacgagcttttaaatatatctgaaggtagcggattagaatctgaaactttaaactta
gcaagaaccttagaaggttctgtaagaaacactggtattcatgcttgtggtgtaattatt
acaccagatgatattaccaaattcgtacctgtatctttggcaaaagattcagatttatac
gttacacaatttgataactcggtagtagaaagtgcaggtctacttaaaatggacttttta
ggactaaaaaccttaaccttaattaaggatactgtaaaaattgttaaggcaaaacatgat
attttattagatcccgaaaactttccgcttgacgatgtaaaaacatttgagttattccaa
agaggagaaacggttggtgtgtttcagtatgaatcaccaggaatgcaaaaacaccttaag
gatttaaaaccaactgtttttgacgatttaattgccatgaatgccttgtacagacctggt
ccaatggaatacataccaagttttgttagaagaaaacatggtgatgaagatattgagtat
gacttaccagcaatggaagagtacttaaaagaaacctatggtattaccgtttatcaagag
caggtaatgcttttgtcacagaagctagcagactttactaaaggtgaggccgatgtacta
cgtaaagcaatgggtaaaaagcaaattgctgtacttgataaaatgaaacctaagtttatt
gagcaagcaagtgctaaaggacatgatgctaaaaaactagaaaaaatttggaaagattgg
gaagcatttgcaagttatgcctttaacaaatcccactcaacatgttatgcatggattgct
tatcaaacagcgtatttaaaagcacattatccagcagaatatatggctgcagtattatct
aataatatgaatgacatcaagcaggttacatttttcatggaagaatgtaaacgtatgaag
ttgtctgtacttggaccagatgtaaatgagtcgttttataagttttcggtaaataaagat
aatgctgtgcgttttggtatgggagccattaaaggggttggtcatggcgcagtaatgact
atagtgaataatagagaagaagatgggccttatacttctattttcgatttagctaaacgt
atagatttgcgtgcagccaataaaaaagcttttgaaaatcttgctctagcaggaggtttt
gacgagctaggtgatacgcatcgtgctcaatacttttttaaggatggaagcgaattaact
tttcttgaaaaggctataaaatatggagcaaagcatcaagaaaatgaaaattcatctcaa
gtcagtttgtttggtggagaaagtgaagtgcaaatagaagagcctcagataccaaattgc
gacacttggggaacaatggaaaaattatcaagagaacgagaagttgtaggtgtctatatt
tctggtcatcctttagatgattttaggacagaaatgaaatcattttgtagtggaactgtt
tcttattttcatgatttagctcctcatgttaataaagaaatcacctttggtggagtcgtt
acagatgtgcaacatcgtgtgagtaagcaaggaaaaggttgggcaatgtttactattgaa
gattacacagattcttatgagtttagaatatttggtgaagattatttaaaacacaggcca
tttttacttcaaaatacctttgtgcatgttaaaacgtttgttcgtgatggatgggttaat
cgtgatacaggtaaaaaaagtgaccctaggttgcagtttaatagtttccagttattgcat
gatgttttagaaaaaaatgtcaaaaaattatcgattcaattaaatataaaagagcttgaa
gaagataaaattaagcagcttaaagagttaatctcaatgtatcctggtaatcatgcttta
acttttttagtgtacgataacagagataaaattaaattaacaatgatgagtcgtagacaa
aaaattaacgtcactaatgagttgttaaatatcttaaacgaaaaccaaatacattattta
ataaatcagtaa
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