KEGG   Olleya aquimaris: DZC78_15585
Entry
DZC78_15585       CDS       T05582                                 
Name
(GenBank) RecQ family ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
oaq  Olleya aquimaris
Pathway
oaq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oaq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DZC78_15585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oaq03019]
    DZC78_15585
   03400 DNA repair and recombination proteins [BR:oaq03400]
    DZC78_15585
Enzymes [BR:oaq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DZC78_15585
Messenger RNA biogenesis [BR:oaq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DZC78_15585
DNA repair and recombination proteins [BR:oaq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DZC78_15585
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind PSD1 TPR_AP5Z1 Phage_rep_O Cas3-like_C_2
Other DBs
NCBI-ProteinID: AXO81742
LinkDB
Position
complement(3431268..3433169)
AA seq 633 aa
MKHPINILERYWKFTAFRPLQEDIINAVIANEDTFALLPTGGGKSVCFQVPAIAKEGICI
VISPLVALMKDQVKALQKKGVKAIALTSGISSKDIDTLLDNCIYGNYKFLYLSPERLQQE
LVQDRIRQMNVNLIAVDEAHCISQWGNDFRPAYKNITILRQLHPTVNVIALTASATPEVI
EDIKTELDFISPKVFKQSFYRPNIAYMVFEEEDKYFRLEAILNKNKQPSIIYVRNRRLSL
EITQYLEQKNITSTYYHGGLNNTLKDQHLNDWLLGKKQVMVATNAFGMGIDKSDVKTVIH
INLPDSIESYFQEAGRAGRDETKAYAVILKNKNDDNALNKQFLNVLPTVDFTKLVYRKLC
SYFQISYGEGTYQTFDFNFNDFCKTYKFNTVTTYNTLNILNNTSIITLSKQFNKRIEVQF
TVSSNTLFRYLETHKSFEIITKSILRTYGGIFEHSTKINSSLIAEKANVQEQKLISVLTQ
LEKDQIITLNINKTDAQITFIEPREDEKTINRVATIIKQQNLLKQKQVKAVLDYVNNDQI
CKSIQLLTYFGEKDVDKCGICSVCISAKAKPKTDIKTVKHGIITNLEFGAKTSKALFTAL
PFTEAQINATIKILLEDNTIEITKTNSYKLKHL
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgaaacatccaattaacatattagaacgttattggaaatttacagcctttagaccactt
caagaagatattattaatgctgttattgctaatgaagacacttttgctttactaccaact
ggtggaggaaaaagtgtgtgtttccaagttcctgctatagctaaagaaggaatatgtatt
gttatttcgcctttagtcgctttaatgaaagatcaggttaaagcgctacaaaaaaaaggc
gttaaagcaattgctttaactagcggaatatccagcaaagatatagacactctattggat
aattgtatttatggtaattataagtttttgtatttgtcgccagaacgcttgcaacaagaa
ttagttcaagatcgtataagacaaatgaatgttaaccttattgctgtagatgaagcccat
tgtattagtcaatggggaaatgactttagacctgcttacaaaaacataactattttacgt
cagttacatcctacggttaatgttattgcgttaacagcaagtgctactcccgaagttatc
gaggatattaaaaccgaattagattttattagccctaaagtatttaagcaatctttttac
agaccaaacatagcttatatggtttttgaagaagaagacaaatactttagacttgaagcc
atattaaataaaaacaaacaaccatccataatttatgttagaaacagacgcttgtctctt
gaaatcactcaatatttagaacaaaaaaacataactagcacttattatcatggaggctta
aataacacgcttaaagatcaacatttaaacgattggcttttaggtaaaaaacaagttatg
gttgctacaaatgcttttggaatgggtattgacaagtctgatgttaaaaccgttatacac
attaaccttccggatagtattgaaagctattttcaagaagctggacgtgcaggacgtgat
gagactaaggcttatgctgttatacttaaaaacaaaaatgatgataacgcattaaacaaa
cagtttttaaatgtattaccaactgtggacttcactaaattggtataccgtaaattgtgt
agttattttcaaatctcatatggtgaagggacctatcaaacttttgattttaattttaat
gacttttgtaaaacctataagtttaacactgtaacgacttacaacacactaaacatactt
aataatacaagtattataactttaagcaaacagtttaataaacgtattgaagtacagttt
acagtgtcaagcaatacgttatttagatatttagaaacacataaaagttttgaaattatt
actaaatctattttaagaacctatggtgggatttttgaacatagcaccaaaataaatagt
agcctaattgccgaaaaagctaatgtgcaagaacaaaaactaatttcggttttgacacag
ttagaaaaagatcaaattataaccttaaacattaataaaactgatgctcaaatcactttt
attgaacctcgtgaagacgaaaaaacaataaaccgtgttgctactattattaaacagcaa
aacttactaaaacaaaaacaagtaaaagctgttttagattacgttaataatgaccaaatt
tgcaaaagcattcaattattaacctattttggtgaaaaagacgttgacaaatgcggaatt
tgtagtgtttgtatttccgcgaaagcgaaaccaaaaacagacattaaaacagtaaaacat
ggtataattaccaatttagaatttggtgcaaaaacatctaaagctttatttactgcttta
ccctttacagaagcacaaattaatgctacaataaaaatattattggaagacaatactatt
gaaattacaaaaactaatagttacaaattaaaacatttatga

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