Octadecabacter arcticus: OA238_c00040
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Entry
OA238_c00040 CDS
T02539
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
oar
Octadecabacter arcticus
Brite
KEGG Orthology (KO) [BR:
oar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oar03032
]
OA238_c00040 (gyrB)
03400 DNA repair and recombination proteins [BR:
oar03400
]
OA238_c00040 (gyrB)
Enzymes [BR:
oar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OA238_c00040 (gyrB)
DNA replication proteins [BR:
oar03032
]
Prokaryotic type
DNA Topoisomerases
OA238_c00040 (gyrB)
DNA repair and recombination proteins [BR:
oar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OA238_c00040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGI70280
UniProt:
M9RKC3
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All DBs
Position
3970..6387
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AA seq
805 aa
AA seq
DB search
MTDEQQTPEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVNVKIHDDGSISVSDNGRGIPVGIHEGEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDYLELRIWRNGKEHYARFEGGFTVKHLEVVADCGDRTGTEVRFLASL
DTFSNRDFYFETLEKRLRELAFLNSGVRIILTDERPAEHLVSELYYDGGVKEFVKYLDRS
KTSILPEPIYVIGERDEIVVEVAMWWNDSYNEMVLPFTNNIPQRDGGTHMAGFRAALTRT
INNYAQSSGIAKKEKISFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVENI
MNEKLSEWFEENPQIARIVVSKIVEAAHAREAARKARDLTRRKTAMDVNFLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRQTQAILPLKGKILNVERARFDRMLGSQEIGNLVM
ALGTGIGRDEFNIDKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPQLIERGHLYIAQP
PLYKVSRGKSEVYLKDQAAMNDYLTEQGVEGAMLRQGNGEEIGGADLRRVVDEAGRLKRV
LDAFPTHYPRHILEQAAIAGAFVSGAVEADLQGVADKVAARLDLIANEWERGWQGRITQD
KGIRLARILRGVEEVRTLDGPMMRSGEARKSGTFTQHLQDVYNTPATLIRKDRVQNIYGP
LDLLKAVLEEGERGLSLQRYKGLGEMNPSQLWETTLDPDARTLLQVKVDDVAEADDLFTK
LMGDVVEPRREFIQQNALNVENLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgagcagcagacgccggaagagtacggcgccgattctatcaaagttctcaag
ggcttggaggctgtccgcaagcgtcccggcatgtatatcggggacacggatgacgggtcc
ggcctgcaccatatggtgtacgaagtcgtggacaacggcatcgacgaggcgctggccggc
catgcggacgcggtgaacgtcaaaatccacgacgacgggtcgatttctgtcagtgataac
ggtcgcggaattcctgtcggcatccacgaaggagaaggcgtctcagcggccgaggtcatc
atgacccagttgcacgctggcggcaaattcgacagcaattcctacaaagtgtccggcggt
ctgcacggcgtcggcgtatcggttgtgaacgcgctgtcggactacctcgaattgcggatc
tggcggaatggcaaagaacactacgcacggtttgagggcggatttaccgtcaagcatctc
gaagttgttgccgactgcggtgatcggacaggcaccgaggttcgcttccttgcgtcgctc
gatacgttctccaaccgcgacttctattttgaaacgctggaaaaacgcctgcgcgaactg
gcattcctgaactccggcgtgcgcatcatactgactgacgaacgccctgccgaacacctc
gtctctgagctgtattatgacggtggtgttaaggagtttgtcaaatacctagaccgctcg
aaaacctcgatcctgccggaaccaatctatgtgatcggcgaacgtgatgagatcgtcgtc
gaagtcgcgatgtggtggaatgacagctacaacgaaatggttctgccattcaccaacaac
atcccacaacgcgacggcggcacacacatggccggtttccgcgctgccctgacccgcaca
atcaacaactacgcgcagtccagcggcatcgcgaaaaaggaaaagatcagctttacgggt
gacgacgcccgcgaaggcctgacttgcgtgctgtccgtcaaagtgccggacccgaaattt
tccagccagaccaaagacaaacttgtgtcgtcagaagtgcggcccgccgtcgaaaacatc
atgaacgaaaagctgtctgaatggttcgaagagaacccgcagatcgcccgcatcgtggtg
tctaaaatcgtcgaagccgcccatgcccgcgaagccgcccgaaaggcgcgcgacctcaca
aggcgcaaaaccgcgatggatgtgaatttcctggctggcaaactgaaagactgttccgaa
aaagatccctccaaaaccgaagtcttcttggtggagggcgactcggctggtgggtctgcc
caaacgggtcgcgaccgccaaacgcaggctattttgccgctcaaaggtaagatcctgaac
gtcgaacgcgcacggtttgaccggatgctcggctctcaggaaatcggcaaccttgtcatg
gcgctgggtacgggcatcgggcgcgatgaattcaacatcgacaaattgcgctaccacaag
atcgtcatcatgaccgacgcggacgttgacggcgcgcacattcgcacgctgcttttgacc
ttcttcttccgccaaatgccccaattgatcgaacgtgggcacctctatattgcgcaaccg
ccgctctacaaagtttcgcgcggcaagtccgaggtttacctcaaagaccaagccgcgatg
aacgactacctgacagaacagggtgtcgaaggtgcgatgttgcgccaaggcaacggtgaa
gaaatcggcggtgcggacctgcgccgtgtggttgatgaagcgggccgtttgaaacgcgtg
cttgatgcgttcccgacccactatccacgccatatcctcgaacaggcggccattgcgggc
gcctttgtgtccggcgcggtcgaggctgatttgcaaggtgtggccgacaaagttgcagcg
cgtctcgacctgattgcgaatgaatgggagcgtggctggcaaggccgcattacgcaggac
aaaggcatccgtttggcccgtatcctgcgcggcgtcgaagaagtccgcacgcttgacggc
ccgatgatgcgctctggcgaggcacgcaaatcgggcacgttcacccagcacttacaagac
gtgtacaacacccccgccacgctgatccgcaaagaccgcgtgcaaaacatctacgggccg
ctggatctgcttaaggccgtgctcgaagaaggcgaacgcggactgtccttgcagcgctat
aagggcttgggagagatgaacccaagccagttgtgggaaaccacgctggaccccgacgca
cgcacattgttgcaagtgaaggtcgacgatgtggccgaagccgacgatctattcaccaag
ctgatgggcgacgtcgtggaaccacgccgagaattcattcaacagaatgcgctcaacgtc
gaaaacttggacttttag
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