Octadecabacter arcticus: OA238_c07700
Help
Entry
OA238_c07700 CDS
T02539
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oar
Octadecabacter arcticus
Pathway
oar03420
Nucleotide excision repair
oar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OA238_c07700 (pcrA)
03430 Mismatch repair
OA238_c07700 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oar03400
]
OA238_c07700 (pcrA)
Enzymes [BR:
oar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OA238_c07700 (pcrA)
DNA repair and recombination proteins [BR:
oar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OA238_c07700 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
OA238_c07700 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGI70987
UniProt:
M9RFQ7
LinkDB
All DBs
Position
801554..804067
Genome browser
AA seq
837 aa
AA seq
DB search
MSSYSDEDAFEAAAAPDARARPSLSQRAMAPPHVDYFEGLNPAQRQAVETLNGPVLMLAG
AGTGKTKALTCRIAHLMATGGARPDEILAVTFTNKAAREMMNRIGGLTQGASDGMRWLGT
FHAICVKLLRRHAELVGLKSNFTILDTDDQLRLLKQLIRASSIDEKRWPPRMLAGIIDGW
KNKAWTPAQVPVGESSAYDDKGIDLYAAYQHRLKELNACDFGDLLLHMVTIFQTHADILA
TYQRWFKYILVDEYQDTNVAQYLWLRLLAQGHKNICCVGDDDQSIYGWRGAEVGNILLFE
KDFPGAHVVRLEQNYRSTGHILGAAAGVIDANKDRLGKTLFTDGEDGEKVRLIGHWDGEE
EARWIGEDIESMQRGTRGLDAMPLNSMAILVRASHQMRSFEDRFLTIGLPYRVIGGPRFY
ERMEIRDAMAYFRLAVSQDDDLAFERIVNTPKRGLGDKAVQTIQITARTNGVNLIEGARL
CVSGGLIKGRGGNALRELVQGLDRWHATLHGQSQSQSNGVTRGDMADDDESVIDDGPTVE
VFDGASNVNHVELAEVILDECGYTAHWQNEKTPEAPGRLENLKELVKALENFDSLQGFLE
HISLIMDNAKDEEDDKVTIMTLHGAKGLEFPSVYLPGWEDGLFPSQRSMDESGLKGLEEE
RRLAYVGITRAEKHCTISFTSSRLVYGQWQSQMPSRFIDELPEENVEVLTPPGLYGGGFG
AAGMSARANPVSEGIASTLHEKMAKADVYNSPGWRRLQSRSQQRSMSQPKESRNSVIDMK
ATSSFTTGERVFHQKFGYGEVMEIEGDKLLIEFDKAGEKKVVAKFIVSADKANDVPF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttattcagacgaagatgcctttgaggccgccgccgcccccgacgcacgggcg
cgaccatccctgtcccaacgggcgatggcgccgccccatgtagattactttgaggggttg
aaccctgcccagcggcaagctgttgagacgctgaatggtcctgtgctgatgctggcgggg
gcgggcacgggcaagaccaaggcgctgacctgccggatcgcgcatttgatggccactggc
ggcgcccgtccggacgagattttggcggtaacgtttaccaacaaagccgcgcgcgaaatg
atgaatcgcatcggtgggctgacgcaaggcgcgtcagacgggatgcgctggcttggcacg
ttccatgcaatctgcgtgaagctgctgcgtcgccacgctgaactggtcgggctgaaatct
aactttacgattttggacaccgacgaccagctgcgcctgctcaagcagcttatcagggcc
tccagtattgatgaaaaacgctggccgccgcgcatgttggcgggtatcattgatggatgg
aagaacaaggcctggacgccagcccaagttccggtcggcgaaagcagcgcctacgacgac
aagggtattgatctctatgccgcctatcagcatcgcctgaaagagctgaacgcctgcgat
tttggcgatctgttgctgcatatggtgacgattttccagacccacgcagatattctggcg
acctatcagcgctggttcaaatacatccttgtggacgaataccaagacaccaacgtcgcg
caatatctttggctgcgtctgctcgcgcaagggcacaagaacatctgctgtgtcggtgat
gatgaccagtcgatttatggttggcgcggcgcggaagtcggcaacatcctactgttcgaa
aaggattttccaggcgcgcatgtggtgcggttggaacagaattaccgatcaaccggacat
atacttggcgcggcggcgggcgtgattgacgccaacaaggatcgccttggcaagacactg
tttaccgacggggaagacggcgaaaaggtgcgcttgattggccattgggacggtgaggaa
gaggcgcgttggatcggtgaagacatcgaatccatgcagcgtggcacccgtggtctggac
gcaatgccgctcaattcaatggccattctggtgcgggcatcgcatcagatgcgcagtttt
gaggaccggttcctgaccatcggacttccctaccgcgtgattggcgggccgcggttttat
gaacgcatggaaatacgtgacgcaatggcttatttccggctcgcggtgagccaagacgat
gatctggcgtttgaacgcatcgtcaacacacccaaacgcggacttggcgacaaggcggtg
cagacgatccagatcacggcacgcaccaacggggtgaacctgattgagggtgcgcggctt
tgtgtcagcggtggtctgattaagggcaggggcggcaacgccttgcgcgaattggtgcag
gggctggatcgctggcacgcgacattgcacggccaatcgcaaagccagtcaaacggggtg
acacgcggcgacatggctgacgacgacgaatccgtcattgatgacggccccaccgttgag
gtctttgacggcgcatccaacgtcaatcacgtcgaactggccgaagtcattttggacgaa
tgcggctacactgcgcattggcaaaacgagaaaacaccagaggcgccggggcggttggag
aacctaaaagagctcgtcaaagcgcttgaaaattttgacagtttgcaaggatttctagag
catatcagccttattatggacaatgccaaggacgaagaagacgacaaggtcaccatcatg
acgttgcacggcgccaagggtctggaatttccgtcggtgtatttgcccggctgggaagac
gggctgtttccgtcccagcgcagcatggatgagagcggtcttaagggcttggaagaagaa
cggcgtcttgcctatgtcggcatcacgcgggccgaaaagcattgcacgatttcgttcaca
tccagccgccttgtctatggccaatggcaaagccaaatgccgagccggtttattgacgag
ttgcccgaagaaaacgttgaggttttgacgccgccgggtctgtatggtggcggatttggc
gccgctggcatgtccgcgcgggccaatcccgtcagcgaaggcattgcatccacgttgcat
gaaaagatggccaaggccgacgtctacaattcccccggttggcgacgtttgcaaagccgg
tcccagcagcggtcgatgtcgcaacccaaagaatcccgcaattcggtgatcgacatgaag
gccacgtcgtccttcacaaccggagaacgcgtgttccaccagaaattcggctatggtgag
gtaatggaaatcgagggcgataagctgttgattgaattcgacaaggctggtgaaaagaag
gtcgtggcgaagttcattgtcagtgctgacaaagccaatgatgtgccgttctga
DBGET
integrated database retrieval system
