Octadecabacter arcticus: OA238_c12680
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Entry
OA238_c12680 CDS
T02539
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
oar
Octadecabacter arcticus
Brite
KEGG Orthology (KO) [BR:
oar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oar03016
]
OA238_c12680
Enzymes [BR:
oar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OA238_c12680
Transfer RNA biogenesis [BR:
oar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OA238_c12680
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Phage_tail_T
Motif
Other DBs
NCBI-ProteinID:
AGI71434
UniProt:
M9RFS5
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All DBs
Position
1323246..1324433
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AA seq
395 aa
AA seq
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MWAQEYEKAQMKTITTTAELATYCAQAAKYPYVTVDTEFLRERTYYSKLCLIQLAYMGEG
GDDAVLVDPLAEGLDLAPLYELFKDENVVKVFHAARQDLEIFFVDQGIIPKPLFDTQVAA
MVCGFGEQAGYETLVRKIAKDNVDKSSRFTDWSRRPLTDAQKTYALADVTHLRVIYENLS
AELEKSGRKKWVAEEMAVLNDPATYQADPDNAWKRVKTRTSSGKFLSIVRELARFRELHA
KNRNIPRNRVFKDDALVEIASTKPTSEDDLGRSRLLLREARRGDIATGILAAVQAGLNTK
PKDAPRIDASREKLQVNPALADMLRVLVKSAADNEGVAQKLIANSADLDAIAGGLRDVAA
LSGWRKEVFGADALRLCDGKIGLAVKGEKVVTFTL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcccaagaatatgaaaaggcccagatgaagaccatcacaacaacagccgagctt
gcgacgtattgcgcccaggccgcgaaatatccctacgtgaccgtggacaccgaattcctg
cgcgaacggacgtattattcaaagctttgtctcattcagctggcctatatgggcgagggt
ggcgatgatgcggtgctggtggacccattggcggaaggccttgatttggcaccgctgtat
gagctgttcaaagacgaaaacgtggtgaaagtctttcatgctgcacgccaagacctcgaa
attttctttgtggatcagggcattataccaaagccgctgtttgatacacaggttgcagcg
atggtgtgtggatttggcgaacaagctggctatgagaccttggtgcgaaaaatcgccaaa
gataacgttgataaatcatcccgatttaccgactggtcgcgccgccctttgacggatgca
caaaagacctatgcgctggccgacgtgacccatttacgggtgatttatgagaatctgtca
gccgagctcgaaaaatctggccggaaaaagtgggtggccgaagaaatggcagttctgaac
gatccagcgacctatcaggcggaccctgataacgcatggaaacgtgttaaaacgcggaca
agttcgggaaaattcttgtcaatcgttcgtgaattggcccgattccgcgagcttcatgca
aaaaaccgaaatatcccgcgtaaccgtgtgttcaaggatgacgcgctggttgaaatcgcg
tcaaccaaaccaacgtccgaagacgatctcgggcggtccagattgctgttgcgcgaagcg
cggcgcggcgacattgcgaccggtattttggcggctgtacaggcaggtctgaacaccaaa
cccaaggacgcaccgcgcatcgacgcgagccgtgaaaagctacaggtgaacccggcgctg
gcggatatgttgcgcgttttggtgaaatcggcggcggacaatgaaggtgttgcacaaaag
ctgatcgcaaacagcgccgatttggatgctatcgcgggcggattgcgcgatgttgcagcc
cttagcgggtggcgcaaagaagtgttcggcgcggatgcgttgcggctgtgtgacggcaaa
attggcttggcggtaaagggcgaaaaggttgtgacctttacgctgtga
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