Octadecabacter arcticus: OA238_c21040
Help
Entry
OA238_c21040 CDS
T02539
Name
(GenBank) exonuclease
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
oar
Octadecabacter arcticus
Pathway
oar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OA238_c21040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oar03400
]
OA238_c21040
Enzymes [BR:
oar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
OA238_c21040
DNA repair and recombination proteins [BR:
oar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
OA238_c21040
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OA238_c21040
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OA238_c21040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ExoI_C
Motif
Other DBs
NCBI-ProteinID:
AGI72195
UniProt:
M9RQX1
LinkDB
All DBs
Position
complement(2216138..2217640)
Genome browser
AA seq
500 aa
AA seq
DB search
MDFVFYDLETTGLSPAFDQPLQFAAIYTDENFVEKDRVNIRCRLAPHILPSPQALVVTRV
TPDQLTDPSLPSLFEFSQQVAELTERWAPAIWVGYNTIKFDEEVLRQTFYRNLSPNVYAT
QFNGNTRFDILPAVYAAYVREPDLLAWPKDDTGRRSFKLDRLAPANGFKAHNAHDALGDV
EATIHIARLIAMRSPALWSELLDNAHKARVQAKLESFRPYELVTRFGGGEPRSYTGCFCG
YSQGNRAQAAFFDLDAADPAEFVEASDEAIFAAVDATPKIIRGVSTNKAPALLEHTAPSE
EHLRRAAVIAEAPAFRLRVGAAMAARFVEDPDAPPKPVERQIYGEFYSNADKQLLQEFQH
ATWPRRQEIVASLTDPRLRQLGRRLVAFHSPELLSSEETALFNGFLREKWSAPDGPETEW
MTHGKAQAALEELRAAGAAEPHEIDAIVSFFKAWGDRGRKVNKPLGARVLKRCTGKELHG
RSRISRLDQASSSGGQSETS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggactttgtattctacgacctcgaaaccaccggtctttcacccgcatttgaccagccg
ttgcagttcgccgcgatctatactgatgagaattttgtggaaaaggatcgggtcaatatt
cgctgccggctggcgccgcacatcctgccgtcgcctcaggcgttagtcgtcacgcgcgtt
acccctgatcagctgactgaccccagtctgccgtcgctcttcgagttttcgcaacaggtg
gccgagttaacagagcggtgggcgcctgcgatctgggtgggctacaatacgatcaagttt
gacgaggaggtgctgcggcagactttctaccggaacctctcacccaatgtttatgccacg
cagttcaacggaaacacgcgcttcgacattctgccggccgtctatgccgcctatgttcgg
gaacctgatctcctggcttggcccaaggatgatacgggccgccgcagcttcaagctggat
cgactggcacccgccaatggcttcaaggctcataacgcacatgatgctttgggggatgtc
gaggcgaccatccatatcgcacgtctgattgcgatgaggagcccagcactgtggtccgag
ttgctcgataacgcgcataaggcgcgcgtgcaggcgaagctggaaagcttccgtccctat
gagctggtcacccgctttggcggcggtgagcctcgatcctacaccggctgtttctgcgga
tactcccaagggaacagggcccaagcggcattttttgatcttgatgccgcggacccagcc
gaattcgtcgaagcgtctgatgaggcgatctttgcggccgtcgatgccacaccgaagatc
atacggggcgtttccacaaataaagcaccggcgctcctcgagcatacggcgcccagcgag
gaacatctgcgccgtgccgccgtcatcgcagaggcacctgcgtttcgcctgcgtgtgggc
gcggcaatggccgcccgtttcgtcgaggaccctgacgcgccgcccaagcccgttgagcgg
cagatctacggggagttctactccaacgcagacaagcaactgctgcaggagttccagcat
gcgacctggccgcggcgccaggaaatcgtcgccagccttaccgacccacggctgcgccag
cttggtcgacggctggtggcgtttcacagtccagagttgttgagttcggaagaaacggcg
ctcttcaacggctttctgcgcgaaaagtggtccgcgcctgatgggcctgaaaccgagtgg
atgacccacggaaaagcccaagctgcactggaggaactgcgtgccgctggtgctgcagag
ccccatgagatcgacgcgatcgtttcattcttcaaggcatggggtgacagaggacggaaa
gtaaacaaaccgttaggcgctcgtgtgcttaagcgctgcaccggaaaagagttgcacgga
cgaagtagaatatcgcgtttagatcaggcgtcctcgagtggtggtcagtccgaaaccagt
taa
DBGET
integrated database retrieval system
