KEGG   Octadecabacter arcticus: OA238_c29360
Entry
OA238_c29360      CDS       T02539                                 
Name
(GenBank) RecD/TraA family helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
oar  Octadecabacter arcticus
Pathway
oar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:oar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OA238_c29360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oar03400]
    OA238_c29360
Enzymes [BR:oar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     OA238_c29360
DNA repair and recombination proteins [BR:oar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OA238_c29360
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 SH3_13 OB_YrrC UvrD_C_2 HHH_5 AAA_11 HHH_2 Viral_helicase1 Helicase_RecD RsgA_GTPase nSTAND3 HHH DEAD NTPase_1 PIF1 UvrD-helicase AAA_28 AAA_24 AAA_16 AAA_22 NPHP3_N AAA_29 HHH_3 T2SSE NACHT AAA ABC_tran AAA_7 ATP-synt_ab SLFN-g3_helicase TrwB_AAD_bind FtsK_SpoIIIE CbiA NB-ARC AAA_5 cobW TsaE ResIII
Other DBs
NCBI-ProteinID: AGI72950
UniProt: M9RT31
LinkDB
Position
3117475..3119685
AA seq 736 aa
MTQQGDSQTEVLAGLVERVTFHSQESGFCVLRLKARGHRDLVTTVGHAAMISAGEWVTAS
GVWINDRTHGLQFKAQFLRTSAPSSIEGIEKYLGSGMIRGIGPVYAKRLVKMFGKDVFDI
IEATPERLREVEGIGPKRADKITAGWADQKVIREIMVFLHQYGVGTARAVRIFKTYGTDA
VQVMSENPYQLAKDIRGIGFRTADMIAEKLGIEKTAMIRVRAGISFALSEAMGNGHCGLP
HADLIGLAGKLLEVPTDLIDSALHEELADETVTADTVGDADCIFLTGLYRAERSIAEQLK
RIQHGALPWPVIDADKALPWIEQKTGLTLAESQAEAVRTALQSKTMVITGGPGVGKTTIV
NSILRILAAKSVKLLLCAPTGRAAKRMTEATGMEAKTIHRLLEFDPKAFGFKRGEENPLD
CDLLVIDESSMVDVLLMQSLLKAVPSTAALLIVGDIDQLPSVGPGQVLADIIGSGTVPVM
RLTEVFRQAAQSKIITTAHAINAGRMPDLAPPEAQADFYFLPAGDPEQAVTRIVKLVAKR
IPQRFGFDPIKDIQVLCPMNRGGVGARSLNIELQAALNPAGDKKVERFGWTFAPGDKVMQ
IENDYDKDVYNGDIGMITDIDMDEGELAVNFEGRTVSFVFGELDTLVPAYAATIHKSQGS
EYPVVVIPVMTQHYAMLQRNLIYTGVTRGKKLVVLVGQKKAVAIAVKNVSGRRRWSKLDE
WLAAQSPRLTRASLPP
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgacgcaacagggtgacagccagacagaggtgcttgcgggcctcgtggaacgggtgacg
tttcacagccaggaatccgggttttgcgtcttacggctaaaggcccgagggcatcgcgat
cttgtcaccacagtaggccatgctgccatgatatcggcaggggaatgggtcacggcttcg
ggcgtgtggatcaatgaccgcacgcacgggcttcagttcaaggcgcagtttctgcgcacc
tctgcgccctccagtatcgaggggatcgagaaatacctcggttccggcatgatccgtggc
atcggcccggtctacgctaaacggctggtgaagatgttcggcaaggatgtgttcgacatc
atcgaagccacgccggagcgcctacgcgaggtcgagggcattggccccaagcgcgcggac
aaaatcaccgccgggtgggccgatcaaaaggtcatccgcgagatcatggtcttcttgcac
cagtacggcgtgggcaccgcgcgcgcggtgcggatcttcaaaacctacggcaccgatgcg
gtgcaggtgatgagcgagaacccctaccagctggcaaaggacatccggggcatcgggttt
cggacggctgacatgatcgcggaaaagctcgggatcgagaagaccgcgatgatacgcgtg
cgcgcgggaatttcttttgcgctgagcgaagcgatgggcaatggccattgcggcctgcca
cacgcggacctgatcggacttgcgggcaaattgcttgaggtgcccaccgacctgattgat
agcgcgctgcacgaagaattggccgatgagacggtgacggccgataccgtgggcgacgcc
gactgcattttcctgaccggactctatagggccgagcgcagtatcgccgaacagctcaag
cgcatccagcatggtgcgttgccttggcctgtgatcgacgctgacaaagcgctgccctgg
atcgagcaaaaaaccggcctcacccttgctgaaagccaggccgaggccgttcgcactgcg
ctgcagtccaaaaccatggtgatcaccggtggccccggagtggggaaaaccaccatcgtc
aactcgatcctgcgcatcctagctgcgaaatccgtcaaactgctgctctgtgcacccacg
ggccgggcggctaagcgcatgaccgaagccacgggcatggaggccaagaccatccaccgg
ctgctggaattcgatccgaaggccttcggtttcaaacgcggcgaggaaaacccgctcgac
tgcgatttgctggtgattgacgaaagctcgatggtggacgtgttgctgatgcaatcgctg
ttgaaggccgtgccgagcaccgcagcgctcttgatcgtgggtgatatcgaccagctgcca
tctgtgggcccgggacaagtgctcgccgacatcatcggctctggcactgtgccggtaatg
cgcctgacagaagtgtttcgccaagccgcgcagagcaagatcatcaccacggcccatgca
atcaacgcgggccgcatgcctgacctcgcgccgcctgaggcacaggcagatttctatttc
ttgcccgcaggcgatcccgaacaggccgtgacacggattgtcaaactggtcgcaaagcgc
atcccccaacgctttgggtttgacccgatcaaagacattcaggtcctctgcccgatgaac
cgtggcggcgtgggcgcgcggtcgctcaacatcgaattgcaggcagcgctgaaccccgca
ggtgataaaaaggtggaacgcttcggctggacatttgcgcccggcgacaaggttatgcag
atcgaaaacgactacgacaaagacgtctacaatggcgacattggcatgatcacagacatc
gacatggacgaaggcgagctggccgtcaattttgagggccgcacagtcagcttcgtcttt
ggtgagctggacacgctggtccctgcctatgcggccacgatccacaaaagccaagggtcg
gaatatccggtggtggtgatcccggtcatgacccagcactacgccatgctgcagcgtaac
ctgatctataccggcgtcacgcgcggcaagaagctggtcgtgctggtggggcaaaagaag
gccgtggccatcgccgtcaagaacgtgtccggtcggaggcggtggtcaaagctggacgag
tggctggcagcgcagtcccctcgcctcacccgcgcgtcgctgcccccatga

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