Octadecabacter arcticus: OA238_c35360
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Entry
OA238_c35360 CDS
T02539
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oar
Octadecabacter arcticus
Pathway
oar03030
DNA replication
oar03410
Base excision repair
oar03420
Nucleotide excision repair
oar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OA238_c35360 (polA)
03410 Base excision repair
OA238_c35360 (polA)
03420 Nucleotide excision repair
OA238_c35360 (polA)
03440 Homologous recombination
OA238_c35360 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oar03032
]
OA238_c35360 (polA)
03400 DNA repair and recombination proteins [BR:
oar03400
]
OA238_c35360 (polA)
Enzymes [BR:
oar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OA238_c35360 (polA)
DNA replication proteins [BR:
oar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OA238_c35360 (polA)
DNA repair and recombination proteins [BR:
oar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OA238_c35360 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OA238_c35360 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AGI73505
UniProt:
M9RUL9
LinkDB
All DBs
Position
complement(3775065..3777851)
Genome browser
AA seq
928 aa
AA seq
DB search
MAFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNVGGDVT
HVAVIFDKGSHTFRNEMYDQYKANREAMPEDLRPQMPLTRDATRAFNIACEEIEGFEADD
IIATLAVQARDAGGRCTIISSDKDMMQLVGGGVVMMDAMKGNKIIDVEGVEEKFGVGPNR
VIDVQALAGDTADNVPGAPGIGIKTAALLINEYGDLETLLDRAAEIKQPKRRETLINHRA
QIELSKRLVTLDDKMDLPFTLDDLEVRDPDPDVLLEFLSQMEFRTMTKRISDKLGVEAPV
IEDVAVASDAPAQVAFDAEKYEWVKDAAALQVWIDRIYARGYVAVDTETTSLNEMRAELV
GVSLCVMAGQACYIPLTHKGGAADDLFGDDALAEGQMDFEDCLAILKPMLEDDSILKIGQ
NMKYDAKIFKRVGITVDPIDDTMLMSYAMNAGLNRHSMDVLSEQYLGHTPIPIKPLLGAG
KSAITFDRVPVEEAVKYAAEDADITLRLWQVLKPQLHSKQVTSVYETMERPLVPVLAKME
MYGIKVDRDTLSRMSNAFAQKMAGLEDELYELAGGKFNVGSPAQVGEILFDQMGLEGGKK
GKTGKYATGADILEDLATEHGFPGLVLDWRQLSKLKSTYTDALQTHINSETGRVHTSYSI
TGANTGRLSSTDPNLQNIPIRTDEGRKIREAFIADEGKVLVALDYSQIELRILAHVANID
ALKQAFRDGHDIHAMTASEMFNVPLDEMTSDVRRQAKAINFGVIYGISGFGLARNLRIPR
AEAQGFIDRYFERFPGIRTYMDDTVAFAKEHNRVETLFGRKIHTPEINAKGPGAGFAKRA
AINAPIQGTAADVIRRAMIRMDAAIAHLPAKMLLQVHDELVFEVDKDAAHDLIAAAREVM
ENAANPVVKFDVPLVVDAGIGATWAEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcggcaaaggctgtcacctacatctgatcgacggatcagcgtttattttccgc
gcgtaccacgcgctgccgcccctgacgcgcaaatcagatggtctgcccgtgggcgcagtg
tcggggttctgcaatatgttgcagcgctatgttgagggaaacgtcggcggtgatgtgacc
catgtggcggtgattttcgacaaaggcagtcacacgtttcgcaatgagatgtatgatcaa
tacaaagccaaccgcgaagctatgcccgaagatttgcgcccgcagatgccgttgacccgt
gatgcgacgcgggcgttcaatatcgcctgtgaggaaatcgagggctttgaggcggacgac
attatcgcgaccttggccgttcaggcacgcgatgcgggcgggcgttgtacgatcatttcc
agcgacaaagacatgatgcagctggtaggcggcggcgtcgtgatgatggatgcgatgaag
ggcaacaagatcattgatgttgaaggcgtcgaggagaaatttggcgtcggccccaaccgt
gtgattgatgtgcaagcgcttgcgggggacacggcagacaacgtgccgggtgcgccggga
atcgggattaagacggctgcgttgctgatcaacgaatacggcgatctggaaacgctcctg
gaccgcgcggcagagatcaagcagcccaaacgccgtgaaaccctgatcaaccatcgcgcc
cagatcgaattgtcaaagcggctggtgacgctggatgacaagatggacctgccgttcacg
ctggatgatctggaagtgcgcgatcctgacccagatgtgctgttggaattcctcagccag
atggaatttcgcaccatgacgaagcggatttcggacaagctgggcgtcgaggcaccggtg
attgaagacgttgctgtggccagcgatgcgcccgcgcaggtcgcatttgacgcggaaaaa
tacgaatgggtcaaagacgccgccgccttgcaggtttggatagaccggatttatgcgcgc
ggttatgtggccgtggacacggaaacgacgtcgctgaacgaaatgcgcgctgaactggtt
ggcgtgtctctctgtgtgatggcggggcaggcatgctacatcccgctgacccataaaggc
ggtgctgcggatgatctgtttggcgatgatgccttggccgaaggccagatggattttgag
gattgtttggcgattttaaagccgatgctggaagacgacagcatcctgaaaatcggtcaa
aacatgaaatatgacgccaagattttcaagcgtgttggcatcaccgtggatccgattgat
gacacgatgttgatgtcttatgcgatgaatgcgggcctcaaccgtcacagcatggatgtg
ctgtcagaacaatatcttggccacacgccgatcccgatcaaacctttgttgggcgctggg
aaatctgccatcacgtttgatcgtgtccctgtggaagaagccgtgaaatacgccgccgaa
gacgccgacattaccctgcgcctgtggcaggtgcttaaaccgcaactgcacagcaaacag
gtgacgtcggtctatgaaacgatggaacgaccgttggttccggtgctggcaaagatggaa
atgtacgggatcaaagtggatcgtgacacgttaagccggatgtccaacgcgttcgcgcaa
aagatggccgggcttgaggacgaattgtatgaactggcgggcggtaaattcaacgtcggc
tcccccgcgcaggtcggtgaaatcctgtttgaccagatgggtcttgagggtggcaagaaa
ggcaagacgggaaaatatgcgaccggtgctgacatcctcgaagaccttgcgacggaacat
ggttttccggggctggtactggattggcggcaattgtccaagctgaaatcgacctatacg
gacgcgctgcaaacccacatcaacagcgaaactggacgtgtgcatacgtcctattcgatc
acgggggccaacacggggcgtctgtcatccaccgatccgaatctgcaaaatattccgatc
cgcaccgacgaggggcgcaaaattcgtgaggcgtttatcgccgatgagggcaaggttttg
gtggcgctggactattcccagattgagttgcggattttggcgcatgtcgcgaatatcgac
gcgctgaaacaggcgtttcgcgatggccacgacatccacgcgatgaccgcgtcagagatg
ttcaatgtaccgctggacgagatgacgagcgatgtgcgaaggcaagccaaggcgatcaac
tttggggtgatttacggaatttcgggctttggtttggcgcgaaatctgcgcattccacgt
gccgaggcgcaggggtttattgaccggtatttcgaacgcttccccggaattcgcacctac
atggatgacacggtcgcgttcgccaaagaacacaaccgcgttgaaacgctgttcggtcgc
aaaattcacacgccagaaatcaacgccaaaggtcccggtgcgggctttgccaaacgtgcg
gcgatcaacgcgcctattcagggtacagctgcggatgtgatccggcgcgcgatgatccgc
atggacgcggccatcgcgcatcttcccgccaagatgctgttgcaggtgcacgatgaactg
gtgtttgaggtcgacaaggatgcggctcacgatctgatcgcagctgcccgcgaggtgatg
gaaaacgccgccaatccggtggtcaaatttgacgtgccgctggtcgtggatgctgggatt
ggcgcgacgtgggcggaggcacactaa
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