Octadecabacter arcticus: OA238_c36680
Help
Entry
OA238_c36680 CDS
T02539
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oar
Octadecabacter arcticus
Pathway
oar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OA238_c36680 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oar03021
]
OA238_c36680 (rpoA)
03400 DNA repair and recombination proteins [BR:
oar03400
]
OA238_c36680 (rpoA)
Enzymes [BR:
oar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OA238_c36680 (rpoA)
Transcription machinery [BR:
oar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OA238_c36680 (rpoA)
DNA repair and recombination proteins [BR:
oar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OA238_c36680 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
AGI73626
UniProt:
M9RT13
LinkDB
All DBs
Position
complement(3912429..3913445)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDVKPGNDPSRQATVVAEPLERGFGLTLGNALRRILMSSLQGAAIT
AVQIDNVLHEFSSISGVREDVTDVVLNLKGVAIRMEVEGPKRLQVQAKGPGVVTAGDISE
SAGIEILNKDHVLCHLDEGAELYMELTVNTGKGYVAAEKNKPEDAPIGMMAIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAFAARILQDQLSIFVNFDEPESAQ
AANDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaaaaactgggctgaactaatcaagccgacacaattagacgtgaagccgggt
aatgacccgtcacgtcaggcaacggttgttgctgagccgcttgagcgtggcttcggccta
acactcggcaacgctttgcgccgcatcttgatgagctcgcttcagggcgctgccatcacc
gccgttcagatcgacaacgttctgcacgaattctccagcatctctggcgttcgcgaagac
gtcaccgacgtggttttgaacctcaaaggtgttgcgatccgcatggaagtcgaaggcccg
aagcgtttgcaagtgcaagccaaaggccccggcgttgttacggctggcgacatttccgaa
tcagctggtatcgaaatcctcaacaaggaccacgtgttgtgtcaccttgatgaaggcgca
gaactctacatggaactgacggttaacaccggcaagggctatgtggcagcagaaaagaat
aagcccgaagatgcgcccatcggtatgatggccatcgacgcgatttattcgccggtcaag
aaagtcagctatgacgtgcagccgacccgcgaaggtcaggtgctcgactatgataagctg
acgatgaaagtcgaaacagacgggtccatcacgccggacgacgccgtggcatttgctgcg
cgtatcctgcaggaccaactgtccatcttcgtgaacttcgatgagcctgagtcggcccaa
gctgcgaacgatgacgatggtctggaattcaacccgctcctcctcaagaaggtcgacgag
ttggaattgtctgtgcgttccgcgaactgccttaagaacgacaatatagtttacatcggc
gatctcattcagaagaccgaagcagagatgctgcgtacaccgaacttcggtcgcaagtcg
cttaacgagatcaaagaagtgctttcgggcatgggcttgcacctcggcatggacgtggaa
gactggccaccggacaacatcgaagatcttgcgaagaaattcgaagactcgttctga
DBGET
integrated database retrieval system
