Octadecabacter arcticus: OA238_c47260
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Entry
OA238_c47260 CDS
T02539
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
oar
Octadecabacter arcticus
Pathway
oar00300
Lysine biosynthesis
oar00470
D-Amino acid metabolism
oar01100
Metabolic pathways
oar01110
Biosynthesis of secondary metabolites
oar01120
Microbial metabolism in diverse environments
oar01230
Biosynthesis of amino acids
Module
oar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
oar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OA238_c47260 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OA238_c47260 (dapF)
Enzymes [BR:
oar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OA238_c47260 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGI74567
UniProt:
M9RQV6
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All DBs
Position
complement(5042705..5043520)
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AA seq
271 aa
AA seq
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MTQTIPSGLPFMKMHGLGNDFVVIDARDGVVRVTDAIVMAMADRHRGIGFDQLAVITKRD
DADAHLTFYNSDGSIAGACGNATRCIARYIMDETTKTDLTLTTVRGILLAHDAGGGMTSI
NMGQPQLTWQEIPLARDVDLDALPIDGAPMATGMGNPHCTFFVEDAEEVDLAAMGALIEH
HPLYPARTNVQFAHLVGPDHLRMRVWERGVGVTLASGSSSCATAVAAHRRGLTGRRVRID
LDGGTIHIDWRNDGVWMTGPTAHVFSGVWYL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaccatcccctccggcttaccgttcatgaaaatgcacggccttggcaacgat
ttcgtggtgatcgacgcgcgtgacggcgttgtgcgggtcacggatgcgattgtgatggcc
atggcggatcgtcatcgtggtatcggatttgatcagctagctgtgataacaaagcgcgat
gatgccgacgcgcacctgactttttacaattccgacggcagcattgcaggcgcgtgcggc
aatgccacgcgctgcattgcgcgctacattatggacgaaacgaccaaaaccgacctgaca
ttgaccacagttcgcggaattttactggctcacgacgctggcggtggcatgacctcaatc
aatatgggccagccgcaactgacatggcaagaaattccgctggcacgtgatgtcgaccta
gatgcgctaccgatcgacggtgcgccaatggcgacgggcatgggaaatccacattgcact
ttctttgtggaagatgccgaagaagttgatctggcagcgatgggtgcgctgattgaacac
catccgctttaccccgcacggaccaacgtacagttcgcgcatctcgttggccctgatcat
cttcgtatgcgggtttgggaacgcggtgtcggggtcacgcttgcgtcaggttcatcgtcg
tgtgccacagctgttgccgcccaccgtagggggctgacagggcgccgcgtgcgtattgat
ctggacggcggcactatccatatcgattggcgcaatgatggcgtctggatgactggcccg
acagcacatgtctttagcggcgtgtggtacctatga
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