Ovis aries (sheep): 100302100
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Entry
100302100 CDS
T03117
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
oas
Ovis aries (sheep)
Pathway
oas03030
DNA replication
oas03420
Nucleotide excision repair
oas03430
Mismatch repair
oas03440
Homologous recombination
oas03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100302100 (RPA1)
03420 Nucleotide excision repair
100302100 (RPA1)
03430 Mismatch repair
100302100 (RPA1)
03440 Homologous recombination
100302100 (RPA1)
03460 Fanconi anemia pathway
100302100 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oas03000
]
100302100 (RPA1)
03032 DNA replication proteins [BR:
oas03032
]
100302100 (RPA1)
03400 DNA repair and recombination proteins [BR:
oas03400
]
100302100 (RPA1)
Transcription factors [BR:
oas03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100302100 (RPA1)
DNA replication proteins [BR:
oas03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100302100 (RPA1)
DNA repair and recombination proteins [BR:
oas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100302100 (RPA1)
MMR (mismatch excision repair)
100302100 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
100302100 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
100302100
NCBI-ProteinID:
NP_001155361
UniProt:
C5ISB1
A0A6P9FRE4
LinkDB
All DBs
Position
11:22790714..22833973
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMEVEVLKSAEAVGSKIGNPVPYNE
GHGQQPVVPPPVSAASPPTSRPQQQNGSPGVASTASKAFGASKTFGKAGGTSQVNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGRHLPTVQF
DFTGIGDLESKSKDSLVDIIGICKNYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNATL
WGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGAGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYK
EYGRRLVMNIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccatcatgcaacagggagatacatct
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaacagtccaccc
cgttatcgactgcttatgagtgatggattgaatactctatcttctttcatgttggcaaca
cagctgaaccctcttgttgaggaagagcaattgtctagcaactgtatttgccagattaac
cgatttattgtgaacacgctgaaagatggaaggagagtggttattttgatggaggtagaa
gttttgaaatcagctgaagcagttggatcaaagattggcaatccggtaccttataatgaa
ggacacggacagcagccagtagttcctcctcctgtctcagcagccagtccaccaaccagc
aggccccagcaacagaatgggagcccaggagtggcttccactgcatctaaggcttttggt
gcctcaaagacatttggaaaagctggcggtaccagccaagtgaacagctctgggggaaca
caggccaaagtggtacccattgccagcctcaccccataccaatccaagtggactatctgt
gctcgtgtcaccaacaaaagtcaaatccgcacctggagcaactctcgaggggaaggaaag
cttttctccatagagctggttgacgagagtggtgaaatcagagcgactgctttcaatgag
caagcggacaagtttttcccccttattgacgtgaacaaggtctattacttctctaaaggc
accctgaagatcgccaacaaacaattcacagccgtcaaaaacgactacgagatgaccttc
aacaatgagacttctgtcatgccctgtgaagacggtcgtcacttacccacagttcagttt
gatttcacggggattggcgacctggagagcaaatctaaagactcgcttgtggacataatc
gggatctgcaagaactacgaagatgtcacaaaaatcacagtgaagtctaacaacagagaa
gtctcgaagagaaatatctatctgatggacatgtcagggaaggtggtgaacgctaccctg
tggggagacgatgctgataaatttgatggttctagacaacctgtgatggccatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactatcttcaagcaccatcatt
gtgaaccctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggtatttccatctctgatctaaagagtggaggagcaggtgggagcaacacc
aactggaaaactttatatgaggtcaagtcggagaacctgggccaaggtgacaagcctgac
tattttagctctgtggcaaccgtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggattgtaacaagaaagtgatcgaccagcagaacggattgtaccgctgc
gagaagtgtgacagtgaattccccaacttcaagtaccgcatgatcctgtcagtcaatatt
gccgattttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaaacactgcgtatctcggggaattaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaactttcgatcttttacgttcaggatcagggtcaaactggagacc
tacaatgatgagtctcggattaaggccacggtggtggatgtgaagcctgtggactacaaa
gaatacggcagaaggctggtcatgaacatcaggaggaacgcggcgatgtga
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