Ovis aries (sheep): 101103737
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Entry
101103737 CDS
T03117
Symbol
SMG8
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
oas
Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101103737 (SMG8)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101103737 (SMG8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
101103737
NCBI-ProteinID:
XP_004012455
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All DBs
Position
11:9855881..9860994
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AA seq
999 aa
AA seq
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MAGPVSLRELLMGASAWTSSESPEGSPTEGGGSAAGGPEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRHQDPGDSGPGIRTEAGAVGEAGGAGDPGAGTGTGTGTGA
GDPVRGGVTAAEGNRTEPGSQDYSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSG
EAGGGLSLPHAEAHEFWKHQEKVQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDG
LRQKVLPLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPK
KHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLL
DQLKSHCTVKDPESLLVPAPLSGSRRYQVMRQHSRQQLSFHTDTGSSSSSGQLVDFTLRE
FLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDPASPTG
ELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQAL
RVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEA
DRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPV
FEPSTPDPAPAKNESSPAPPDADADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPAD
PQAGGDNPEVHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLG
PAKSYNFHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAVPGKRSAVV
MGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYIL
SSSQGRGLKPHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLW
VLRFPYAYVTERGPCFPPKENVQLMSYKVLRGVLKAVTQ
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcccgtcagcctaagagagcttttaatgggcgcctcagcctggacaagctct
gagagtcccgaggggtcccctacagagggtggtgggagcgcggctggcggaccggagcct
ccttggcgggaggatgagatctgcgtggtgggaatcttcggcaaaacggctctgcgcctg
aattccgagaagttttcacttgtgaacacggtgtgcgaccgacaggtctttcccctcttt
cgccaccaagatcctggagattcggggcctggaatcaggaccgaggctggggccgtcggg
gaggctggcggagccggagaccctggggctgggaccgggaccgggaccgggaccggggcc
ggggatccagttcggggaggtgtaactgccgcggaaggcaaccgaactgagccaggttcc
caggattacagccttctgcaagcctattacaaccaagaaagcaaagttctgtaccttctt
cttacttccatctgtgacaattcccagcttctgcgggcttgtcgggcccttcagagcggg
gaagctggaggtggcctctctttacctcatgcagaagcgcacgagttctggaagcatcaa
gagaaggtgcagtgcctcagtctcctttaccttttctccgtctgtcacatattgcttctg
gtccatcccacttgttcctttgacatcacttatgatcgagtattcagagccctggatgga
ctgagacagaaagtactgccccttctcaaaacggctattaaggattgtccagttggtaaa
gactggaaactaaactgccgaccttgcccacctagactccttttcctttttcaactcaac
ggagcactcaaggtagaaccccctcggaaccaagacccagctcatccagataagcccaag
aagcattctcccaaaaggagactgcagcatgccctggaggaccagatctatagaatcttc
cggaagagtcgtgtcttgactaatcagagtatcaactgtctctttactgtacctgccaat
caagcttttgtgtacatagttcccggaagccaggaggaggatccggtaggcatgttgctg
gaccaacttaagagtcattgtactgtgaaagaccctgaatctttgttggtccctgcaccc
ctttctgggtccaggcgataccaggtgatgaggcagcacagcagacaacagctttctttc
cacactgacaccggcagttctagttcttcggggcagctagtggatttcacgcttcgagag
ttcctatggcagcatgtagagctagtactaagcaagaaaggttttgatgacagtgtgggc
aggaacccacagccttcccattttgaacttcctacttatcagaagtggatctcagcagct
tcaaaactgtatgaagtagctattgatgggaaagaggaggacccagcatctcccactggg
gagttaacatctaagattttaagcagtattaaagtcttggaagggtttttggatattgac
acaaaattctcagagaaccgttgccaaaaagctttaccgatggcccatagtgcctaccag
tcaaatttgcctcataattacacaatgactgtccacaagaatcagcttgcccaggctctt
cgagtgtacagccaacatgctaggggtccagcctttcacaaatatgccatgcagttacac
gaagactgctacaagttttggagcaatggccatcagctctgtgaggagaggagtttaact
gatcaacactgtgtacataaatttcactccttacctaaatcaggagaaaaaccagaggct
gatagaaatcctcctgtgctgtatcacaatagccgagctcgatccactggtgcctgtaac
tgtggaaggaaacaggcaccccgagacgatccctttgatatcaaggcagctaactatgac
ttttatcagcttctggaagaaaaatgttgtggaaaattggatcacatcaatttcccagta
tttgaaccaagtactccagatcctgctcctgccaaaaacgaatcatctcctgctccccca
gatgccgatgctgataaacttaaagagaaagaacctcaaacccaaggagagagcacaagc
ctgagtttagctttgagtttaggccagtccactgatagtttaggtacctatccagctgat
ccacaagcaggaggagataatccagaagttcatggtcaaggtgaagtaaaaactgagaag
agaccaaacttggttgatcggcaggcatccacagttgaatatctcccaggcatgcttcat
tcaaattgccccaaaggtctcctacccaaattctccagctggtctttggttaaactaggc
cctgctaaatcttataactttcatactggtttggaccaacagggcttcattccaggaaca
aactatcttatgccttgggacattgtcatcaggactagagctgaagatgaaggagactta
gacacgaattcttggcctgctccaaataaggctgttcctggtaagagaagtgcagttgtc
atgggcagaggaagacggcgagatgacatagcacgagcatttgtgggctttgaatacgaa
gactctcgaggtcgaagatttatgtgctcaggtcctgacaaagtaatgaaagtaatggga
agtggacccaaggaatcagctttaaaagccctgaatagtgatatgcccttgtatattctg
tcatcctctcagggtagagggctaaaaccacattatgctcaacttatgaggctttttgtt
gtggttcctgatgctcctttgcagataatcttaatgcctcaggttcagccaggcccacca
ccatgtccagtattctacccagaaaagcaagaaatcactctcccacctgatggcctctgg
gttttgaggtttccttacgcctacgtgactgagagaggaccttgtttccctccgaaggaa
aacgtgcaattgatgagttacaaggtgctccgtggggttcttaaagcagtaacacaataa
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