Ovis aries (sheep): 101104173
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Entry
101104173 CDS
T03117
Symbol
LIG1
Name
(RefSeq) DNA ligase 1 isoform X4
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
oas
Ovis aries (sheep)
Pathway
oas03030
DNA replication
oas03410
Base excision repair
oas03420
Nucleotide excision repair
oas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101104173 (LIG1)
03410 Base excision repair
101104173 (LIG1)
03420 Nucleotide excision repair
101104173 (LIG1)
03430 Mismatch repair
101104173 (LIG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oas03032
]
101104173 (LIG1)
03400 DNA repair and recombination proteins [BR:
oas03400
]
101104173 (LIG1)
Enzymes [BR:
oas01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101104173 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
101104173 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
101104173 (LIG1)
DNA replication proteins [BR:
oas03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
101104173 (LIG1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
101104173 (LIG1)
DNA repair and recombination proteins [BR:
oas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
101104173 (LIG1)
NER (nucleotide excision repair)
Other NER factors
101104173 (LIG1)
MMR (mismatch excision repair)
Other MMR factors
101104173 (LIG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DDR
PucR
Motif
Other DBs
NCBI-GeneID:
101104173
NCBI-ProteinID:
XP_027834351
LinkDB
All DBs
Position
14:complement(54632912..54660959)
Genome browser
AA seq
958 aa
AA seq
DB search
MERLGPQPEGLLAASPALLCGCRNRKLVAREEEEGGENSDTIMQRSIRSFFQPKKEGKVK
KPEKETSNSIRETESPPKVALKERNRVVSDGDSPVKRPGRKATRVLGSEGEEEEEEAPTT
PRSQEPASDSPQPSPPSLVTLPESSPSRSKPSPAVASPSWIPKRRTARKQLPKRTFQDVL
KEQGEDEDPETKKKKEEGEAETPTESLPEPEGGDKEEVEGGDQPTTPPEPQTSTESPTES
VSEPGVTVKQEPQEDGQAQPPPKAPKTLSSFFSPRKPAVKKEAKEGGPGALRKDETKGHL
DPPSYNPAKNNYHPIEDACWKAGQRVPYLAVARAFEKIEEVSARLRMVETLSNLLRSVVA
LSPADLLPVLYLSLNRLGPPQQGLELGIGEGILLKAVAQATGRQLESVRAEVAEKGDVGL
VAESSRSTQRLVLPPPALTAGGVFAKFRDIAQLAGSASTTKKMDVIKGLFVACRHSEARF
IARALSGRLRLGLAEQSVLAALAQAVSLTPPGQECPPVVVDAGKGKTAEARKTWLEEQGM
ILKQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEA
AFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGRYPDIISRIPKIKLPSVTSFILDTE
AVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQL
LRENFVETEGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHN
WLKLKKDYLEGVGDTLDLVVIGAYLGKGKRAGRYGGFLLASYDEESEEFQAICKLGTGFS
DEELEEHHQRLQALVLPTPRSYVRADGAVAPDHWLDPSDVWEVKCADLSLSPIYPAARGL
VDSEKGISLRFPRFIRVREDKKPEQATTSAQVAGLYKKQSQIQNQQGAEPDSEQEEFY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcttggaccgcaacccgaaggactcctggcggccagtcccgctctactctgc
ggttgcaggaacaggaaactggtggccagagaggaggaggaggggggagagaattctgat
accatcatgcagcgaagcatcaggtcatttttccagcccaagaaagagggcaaagtgaag
aagccagagaaggagacctccaacagcatcagagaaacggagtcccctccgaaggtggca
ctgaaggagcggaatcgagtggtgtctgacggtgactctccagtgaagaggccggggagg
aaggcaaccagggtcctgggcagtgagggcgaggaggaggaagaagaagcccccaccacc
cccagaagccaggagcctgcttcagactctccacagccctcacctcccagtcttgtcaca
ctgcctgagagcagcccttcccgctccaagccctccccagcggttgcgtccccatcatgg
atcccgaagcgtcgcacggcccggaagcagcttcccaaacggacatttcaagatgtcctg
aaagagcagggcgaggacgaggacccggagactaagaagaagaaggaggaaggagaagca
gagacaccaacagaaagcctcccagagcctgaagggggcgacaaggaggaagtggaaggc
ggggaccagcccacgacgccccctgagccccagacctccacagagtccccgacagaaagc
gtttcagagcccggggtgacagtgaagcaggaaccacaggaggatggccaggctcaaccg
ccccccaaagctccaaagaccctcagcagtttcttctccccccggaagccagctgtcaaa
aaagaagcgaaagaaggaggacctggtgctctaagaaaggacgagaccaagggacacctg
gacccaccgagctacaatcctgccaagaacaactaccaccccatcgaggatgcctgctgg
aaggcaggccagagggttccttatctggctgtggcccgggcgttcgagaagatcgaggag
gtctctgctcggctccggatggtggagacgctgagcaacctgctgcgctccgtggtggcc
ctgtcacctgctgacctcctacccgtcctctacctcagcctcaaccgcctggggccgccc
cagcagggcctggagctcggcatcggagagggcatcctcctcaaggcagtggcccaggcc
acgggtcggcagctggagtccgtccgggccgaggtggccgagaagggtgatgtggggctg
gtggccgagagcagccgcagcacccagaggctcgtgctgcccccacccgcgctcaccgcc
ggcggcgtcttcgccaagttccgggacatcgcgcagctggcgggcagcgcttccaccacc
aagaagatggatgtcatcaaaggcctctttgtggcctgccgtcactcagaggcgcgtttc
attgccagagccctgagtggacggctgcgcctcgggctggctgagcagtcggtgctggcg
gcccttgcccaggccgtgagcctcacgccccccggccaagaatgcccccccgtcgtggtg
gacgccgggaagggcaagacggcagaagccagaaagacgtggctggaggagcaaggcatg
atcctgaagcagaccttctgtgaggtacctgacctggaccggatcgtccccgtgctgctg
gaacacggcctcgagcggctcccggagcactgcaggctgagcccaggggttcccctgaaa
ccaatgttggcccaccccacccggggtgtcagcgaggtcctgaagcgctttgaggaggca
gctttcacctgcgaatacaaatatgacgggcagagggcacagattcacgttctggaaggt
ggggaggtgaagatcttcagcaggaatcaggaggacaatactggaaggtaccctgacatc
atcagccgcatccccaagattaaactcccatcagtcacatccttcatcctagacacagaa
gctgtagcttgggaccgggaaaagaagcagatccagccattccaagtgctcaccacccgc
aaacgcaaggaggtggacgcggcagagatccaggtgcaggtgtgtctgtatgccttcgat
ctcatctacctcaacggagagtccctggtacgtgagcccctctcccgacgccggcagctg
ctccgggagaacttcgtggagacggagggcgagttcgtctttgccacctccctggacacc
aaggacacggagcagatcgccgagttcctggagcagtcggtgaaagactcctgcgagggg
ctgatggtgaagaccctggacgtggacgccacctacgagatcgccaagaggtcacacaac
tggctcaagctgaagaaggactacctcgagggtgtgggcgacaccctggacctcgtagtg
attggtgcctacctgggcaaggggaaacgggccggccggtacggaggcttcctgctggcc
tcgtacgatgaggagagcgaggagttccaggccatctgcaagctcggaactggcttcagt
gacgaggagctggaagagcatcaccagaggctccaggccttagtgctgcccaccccgcgc
tcctatgtccgggctgacggcgcggtggcccccgaccactggctggaccccagcgacgtg
tgggaggtgaagtgcgcggacctctccctgtcccccatctaccctgcggcccggggcctg
gtggacagtgagaaggggatctccctccgcttcccccggtttattcgtgtccgtgaggac
aagaagccggagcaggccactactagtgcccaggtggccggtctgtacaagaagcagagt
cagattcagaaccagcagggtgctgagccggactccgagcaggaagagttctattag
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