Ovis aries (sheep): 101104206
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Entry
101104206 CDS
T03117
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
oas
Ovis aries (sheep)
Pathway
oas03013
Nucleocytoplasmic transport
oas03015
mRNA surveillance pathway
oas03040
Spliceosome
oas05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101104206 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
101104206 (NCBP1)
03015 mRNA surveillance pathway
101104206 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101104206 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101104206 (NCBP1)
03041 Spliceosome [BR:
oas03041
]
101104206 (NCBP1)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
101104206 (NCBP1)
Spliceosome [BR:
oas03041
]
Common components
Common spliceosomal components
Cap binding complex
101104206 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
Jnk-SapK_ap_N
DUF2524
Motif
Other DBs
NCBI-GeneID:
101104206
NCBI-ProteinID:
XP_004004282
EnsemblRapid:
ENSOARG00020001711
UniProt:
A0A6P3E154
W5PNL4
LinkDB
All DBs
Position
2:complement(49985800..50023634)
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKSNN
FNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFASTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDFVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQTIHQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgatgggggacaacctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcacttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
cttcctaattacaagagcaagatcttaaggcttctttgtacagttgcacgtcttttacct
gagaagttgaccatttatacaacattagttggactactgaatgccaggaattacaacttc
ggtggagaatttgtagaagccatgattcgccaactgaaagaatcattgaaatcaaacaat
tttaatgaagctgtatatttggtccgttttctgtctgatcttgtgaactgtcatgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtgcctcaggtgcgacgggattggtacgtgtatgcgtttctgtcgtccttgccctgggtt
ggaaaggagttgtatgaaaagaaagatgcagagatggaccgaatctttgccagcactgaa
agctatcttaaaagacgccaaaagactcatgtacccatgttacaagtatggaccgcagag
aaaccacatccgcaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcactgcagcacaacctgcctccattcacaccacctcctcacacagaagactcg
gtgtacccaatgccaagggtcatcttcaggatgtttgattacacagatgatcctgagggt
cctgtaatgccagggagtcattcagtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccattggaaggaaaggaagacttgtgctgcacagctagtgagttatcct
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagcttccagcaccgcctcatatagatgtgatgtacacaacacttctcattgaactatgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatatatg
cgtttggacacgatgaatactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccaattccgttggagctgggaggattggtcagattgtcttactcaagat
ccagaaagtcccaaaccaaagttcgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagattttgtccctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaactctcttcccggacattcagtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctcaaagacgtccctaatcctaatcaggatgatgatgatgatgaaggattcagctttaac
ccactgaaaattgaggtctttgtacagactttgctacacttagcagccaagtcgttcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaaattacatgttctaagagtcatgtttgaggtctggcggaaccatccacagatg
attgctgtactagtagataagatgattcgtacgcagattgttgactgtgctgcagtagca
aattggatcttctcttcagaattatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgtaagatgaacaaacacgttctcaagatccagaaagagctagaa
gaggctaaagaaaaacttgcaaggcaacacaaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaagaacaaatagaaagactgcaggaaaaagtagag
tctgctcagagtgaacaaaagaatctcttccttgtcatatttcagcgttttatcatgatc
ctgaccgagcacttagtacgctgtgagactgacgggaccagtgtgttaacaccatggtat
aagaactgtatagagaggctccagcagatcttcctacagcatcaccagacaatccaccag
tacatggtgaccctggagaacctgctcttcactgctgagttagacccccacatcctggct
gtgttccagcagttctgtgccctgcaggcctaa
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