Ovis aries (sheep): 101106232
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Entry
101106232 CDS
T03117
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X4
KO
K06823
collagen type XVIII alpha
Organism
oas
Ovis aries (sheep)
Pathway
oas04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101106232 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oas04147
]
101106232 (COL18A1)
00535 Proteoglycans [BR:
oas00535
]
101106232 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
oas00536
]
101106232 (COL18A1)
Exosome [BR:
oas04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101106232 (COL18A1)
Proteoglycans [BR:
oas00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101106232 (COL18A1)
Glycosaminoglycan binding proteins [BR:
oas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101106232 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
101106232
NCBI-ProteinID:
XP_027816957
LinkDB
All DBs
Position
1:265929812..266021799
Genome browser
AA seq
1338 aa
AA seq
DB search
MAPRWPWLQPRRRRLLDLLAHLVLLLVVSTASAEPDGEVVEVGLQQLLGEPPPWQVAVVH
DPAVGPAYEFGEDGSGGGQAARSLLPSAFFQDFSLLVRVRPASARAGVLFAVTDPAQAVV
SVGVKLTAARGGRQHLQLLYTEPGATDTRTAASFELPALDGRWTRLALSVDGAYARLFVD
CEEVQGQPLAHSLHDLQLEPDARLFVAQAGGADPEKFQGLISELRLRRDPRVSPRQCQDE
DEDDDDDGASGDLGSGLMETQEHPREELGTPLGPRLPEAPPVTSPPLAGVGTEEDLRTEE
VEESTTVSSLGAQTLPSLGTVGTWDESVWSPGSSVKEQGLKGQKGEPGAQGPPGPIGPQG
PAGPAIDSHEAQPVSGPQGPPGPPGPPGKDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTP
GDVGPKGEKGDPGVGPRGPPGPQGPPGPPGPSFKPDRLTFIDMEGSGFGGDLESLRGPRG
FPGPPGPPGVPGLPGEPGRFGMNSSDVPGPAGLPGVPGRDGLPGVPGPPGPPGIPGKDGQ
PGLTGQKGSLGEAGAPGPKGSKGDPGPIGAPGEHGLAGAPGPAGPPGPPGPPGPPGPGFA
AGFDDMEGSGSPFWSTARGADGLQGPPGTPGVKGDPGAVGPPGSKGEVGADGAPGFPGLP
GREGAAGPQGPKGEKGTQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDRVLASVPGP
EGRAGFAGFPGPAGPKGDLGAKGQQGIPGPKGEKGEPGTFFGPDGRALTPAQKGAKGEPG
FRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDASVGFGMRGPPGPPGPPGPP
GPPGTPVYDSNAFVDSGRPGPPGLPGHQGPSGPKGDKGDVGPPGPRGQFPFDLLQLGAEM
KGQKGERGAAGQKGERGEPGGGGFFGSGVPGPPGPPGYPGIPGPKGESVRGQPGPPGPQG
PPGIGYEGRQGPPGPPGPPGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGSMGTSSGGS
TGLGFQQVRVWATYQMLVDQVPQVPEGWLIYVADREELYVRVRNGFRKVLLEAHMPLPHG
TDNEVAVLQPPLVQLHEGNPYPRREAPHPTARSWRADDILASPPRLPHPQPYPGAPHHGT
YAHLRPVTSTASPSHTHHDFQPVLHLVALNSPQSGGLRGIRGADFQCFQQARAAGLAGTF
RAFLSSRLQDLYSIVRRADRGSLPVVNLRDEVLFPSWEALFLGSQGWLKPSARIFSFDGR
DVLQHPAWPQKSVWHGSDTSGRRLTESYCETWRTDSRAATGQASSLLSGRLLEQKAAGCH
NAFIVLCIENSFMTSSSK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaggtggccttggctgcagccgcggcggcgtcgcctcctggacttgctcgcc
cacctggtcctgcttctcgtggtcagcacagcgtccgccgagccagacggcgaggtcgtg
gaggtggggctccagcagctgctcggtgagcccccgccctggcaggtggccgtggtgcac
gaccccgctgtggggcccgcctatgagtttggcgaggacggcagcggtggaggccaggcg
gcccggagcctcctgcccagcgcgttcttccaggacttctcgctgctggtgcgtgtgcgg
ccggcctcggcgcgtgcgggcgtgctctttgcagtcacagaccctgcgcaggcggtggtc
tcggtgggcgtgaagctgacggcggcgcgtggggggcggcagcacctgcaactgctgtac
acggagcccggagccaccgacacgcgcacagccgccagcttcgagctgcctgcgctggat
ggtcgctggacgcgcctggcgctcagcgtggatggcgcgtacgccaggctcttcgtggac
tgtgaggaggtccagggccagcccctggcgcactcgctgcacgacctgcagctggagccg
gacgcccgcctcttcgtggcccaggccggtggagcggaccctgaaaagttccagggtctg
atctcagagctgaggctgcgcagggatcctcgggtgagcccccggcagtgccaggacgag
gacgaggacgacgatgatgatggggcgtctggagacctgggcagcgggctcatggagacc
caggagcatccccgggaggagttgggcacacccctggggcccaggctccccgaggctcct
ccagtcacttctccacccttggctggagtcggcaccgaggaggacttgagaactgaggag
gtagaggagtcaaccacggtgtcttcgttaggagctcagaccctccccagcttgggcaca
gttggcacatgggacgagagtgtttggagccctgggagcagcgtgaaagagcaaggcctg
aaggggcagaagggagagcccggtgctcagggaccccccggccccatcggcccccagggt
cctgcaggcccagctatagacagccacgaagcacagcctgtttctggaccacagggaccc
cctgggcccccgggacccccggggaaggacggcacccctggaagggatggtgagcctggt
gatcctggtgaagacgggaagcccggggacactgggccacagggcttcccaggaacccca
ggagacgtgggccccaagggcgagaagggggatcctggagtcggaccgaggggacctcca
ggaccccaggggcctccggggcccccagggccctccttcaaacccgacaggctgaccttc
atcgacatggaggggtccggttttggcggcgacctggagagcctccgtggccctcgcggc
ttccccggcccccccgggccccctggtgtcccaggcttgccaggggaaccaggccgcttc
gggatgaacagctcggacgtccctggccccgcaggcctgcccggagtgcctgggagggat
gggctgcctggggttccaggccccccgggacccccaggtattccaggaaaagacggacaa
ccaggactgactggacagaaaggcagcctcggtgaggcgggcgccccaggacccaaggga
agcaagggagaccctggccccatcggcgctcctggggagcacggcctggcaggagccccc
ggacccgcaggcccgccagggccccctggcccccccgggcccccaggcccaggattcgcc
gcagggtttgacgacatggaaggctccgggagccccttctggtcaacagcccgaggtgct
gacgggctgcagggaccgcctggcacgcccggagtcaagggggatcctggagctgtgggg
ccaccagggagcaagggagaagttggagcagacggagcacctggcttccccggcctccca
ggcagagagggtgcagctggaccccagggaccaaaaggagaaaaggggactcagggagag
aaaggagacccagggaaggatggagtggggcagccaggactcccgggacctcctggaccc
ccaggacctgtcgtctacgtgtcggagcaggacagagtgctggcgagcgtgccaggcccc
gagggccgtgcaggcttcgctggcttccccggaccagccgggccaaagggagacctgggc
gccaaaggccagcagggcatcccgggacccaagggtgagaagggagagccgggcacgttc
ttcggccctgacggcagagcactgacccccgcccagaaaggagccaagggtgagcccggc
ttccgaggacccccgggtccgtatgggcggcccggccacaagggagagatcggattccct
ggacggccggggcgtcccgggatgaatggactgaaaggggagaagggggagccgggggac
gccagcgtgggattcggcatgaggggtccacctggcccacctgggcctccagggccccca
ggtcctcccgggactcctgtctacgacagcaacgcatttgtggactctggccgccctgga
cccccgggattgccagggcaccaggggccttctggacccaagggtgacaaaggagatgtg
ggcccgcccggaccacgagggcagttcccgttcgacctcctccagctgggtgccgagatg
aaggggcagaagggggaacgaggggccgctgggcagaaaggagaaaggggtgagcccggg
ggcggaggatttttcggctccggtgtgcctggaccccccggcccgcctggctacccaggg
attccgggccccaagggagagagcgtccgcggccagcctggccctccgggacctcaggga
ccccctggcattggctacgagggacgccaggggcctcctgggcctcccggacccccaggg
cccccgggacccccttcctttcctggcccctacaggcagaccatcagtgttcctggcccg
ccaggcccacctgggcccccaggaccccctggatccatgggcacttcttcagggggatcc
actgggctgggcttccagcaggtgagggtctgggcgacgtaccagatgctggtggaccag
gtgccgcaggtaccggagggctggctcatctacgtggccgacagggaggagctgtacgtc
cgggtccggaatgggttccggaaggttctgctggaggcccacatgcccctcccccatggt
acggacaacgaggtggccgtcttgcagccccccctggtgcagctgcatgagggtaatccc
tacccccgccgggaggccccacacccgacagcgcggtcctggcgggcggacgacatcctg
gccagtcccccgcgcctgccgcacccccagccgtaccccggcgccccgcaccacggcacc
tacgcacacctccggccggtaacctccacggcctcgccctcccacacccaccacgacttc
cagccggtgctgcacctggtggcgctcaacagcccgcagtcgggcggcctgcgaggcatc
cgcggcgccgacttccagtgcttccagcaggcgcgcgccgcggggctggccggcaccttc
cgcgcgttcctgtcctcgcggttgcaggacctgtacagcatcgtgcgccgcgccgaccgc
ggctccctgcccgtcgtcaacctcagggacgaggtgctgtttcctagctgggaggccttg
ttcttaggctcccagggctggctgaagcccagcgcccgcatcttctcctttgacggcaga
gatgtcctgcagcatcccgcctggccccagaagagcgtgtggcacggctcagacaccagt
gggcgccggctgaccgagagctactgcgagacgtggcggacggacagcagggcggccacg
ggccaggcctcctcgctgctgtcaggccggctgctggagcagaaagccgctgggtgccac
aacgccttcatcgtcctctgcatcgagaacagcttcatgacctcctcctccaagtag
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