Ovis aries (sheep): 101107033
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Entry
101107033 CDS
T03117
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X2
KO
K14323
protein CASC3
Organism
oas
Ovis aries (sheep)
Pathway
oas03013
Nucleocytoplasmic transport
oas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101107033 (CASC3)
03015 mRNA surveillance pathway
101107033 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101107033 (CASC3)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101107033 (CASC3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101107033
NCBI-ProteinID:
XP_004012907
LinkDB
All DBs
Position
11:40183480..40205603
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AA seq
802 aa
AA seq
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MAGQGPEPTARPRATLLARGPTAGKSGASPRPLMSPITQFRAPANVLQRASSAPSPSPRK
TGRTAPQVKHAGTGSQASRQPLRRAGYVRIWPAAAVLRKMADRRRQRASQDTEDEESGAS
GSDSGGSPARGGGSCSGSVEGGGSGSLPSQRGGRAGALHLRRVESGGAKSAEESECESED
GIEGDAVLSDYESAEDSEGDDGEYSEEENSKVELKSEANDAANSSAKDEKGEEKPDTKGT
VTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEE
VRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKP
RFGSPPQRDPNWIGERPSKSHRHQGPGGTLPPRTFINRNAAGTGRMSAPRNYSRSGGFKE
GRTGFRPAEAGGQHAGRSGETVKHETSYRSRHLEQTPVRDPSPEADAQVLGSPEKEEVAP
EIPNPAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAGKVAEEVPPPPEGLTPAPPVPEAT
PPTPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQPAFLQSRELRGMPNHIHMGAG
PPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIMEGHYYDPLQFQGPIYTHG
DSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTY
FSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYGGVTYYNPAQQQVQPKPSPP
RRTPQPVTIKPPPPEVVSRGSS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcaaggaccggagccgactgcccgcccaagagcaactctcctcgccaggggc
ccaaccgccgggaagtcaggggcctcaccacgccccctcatgtcaccaattacgcaattc
cgcgcacccgcaaacgtgctgcagcgtgccagctccgcccctagcccctccccccgaaaa
acggggcgaacagcgccgcaagtgaagcatgctgggaccggctctcaagcctcccggcag
cccctgcgacgggcggggtacgtcaggatctggccagcggcggccgttctccgtaagatg
gcggaccggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgcctcc
ggctcagacagcggcggttccccggcgcggggcggcgggagctgcagcggtagcgttgaa
ggcggcggcagcggctctctgccttcccagcgcggaggccgagctggggcccttcatctg
cggcgagtggagagcgggggcgctaagagcgctgaggagtcggagtgtgagagtgaagat
ggcatcgagggcgatgctgttctctcggattatgaaagtgcagaagattcagaaggcgat
gacggggagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaatgat
gctgctaattcttcagcaaaagatgagaagggagaagaaaagcctgacaccaaaggcact
gtgactggagagaggcaaagtggggatggacaggaaagcacagagcctgtggagaacaaa
gtcggtaaaaagggccctaaacatttggatgatgatgaagatcggaagaacccagcatac
ataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggaagaa
gtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcatgac
aagtttcgggaagatgagcaggctccaaagtcccgacaggagctcattgctctttatggc
tatgacatccgctcagctcacaatcctgatgatatcaaaccccgaagaatccggaaacct
aggtttgggagtcctccacaaagagatccaaactggattggtgagcggccaagtaagtct
caccgccaccagggtcctgggggcaccctaccacccaggacatttatcaacaggaatgct
gcaggtactggccgcatgtcggctcccaggaattactctcgatctggaggcttcaaggaa
ggtcgtactggttttaggcctgcagaagctggtggacagcatgctggccggtctggtgag
actgttaaacatgagactagttaccggtctcggcacttggagcagactcctgtaagggat
ccatctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggtagcccct
gagataccaaatcctgctcctgatactgcaccaccagctcctgacaggcctgttgaaaag
aaatcctattcccgggcaagaagaaccagaatcaaagctggagatgcaggcaaggttgca
gaggaggtgccccctccacccgaagggctgaccccagcacctccagttccagaagctaca
cctcctacgcctgctaagactggaaactgggaggctccagtggattctactacagggggt
cttgaacaagatgtggcacaactaaatataacagaacaaaattggagtccagggcagcct
gccttcctgcagtcacgggagcttcggggtatgcccaaccatatacacatgggagcagga
cctccacctcagttcaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgc
tattcatcacaacggcaaagacctgtgccagagccccctgcccctcctgtgcatatcagc
atcatggaaggacattactatgatccattgcagttccagggaccaatctatacccatggt
gacagccctgccccactgcctcctcagggcatgattgtacagccagaaatgcaccttccc
cacccaggtttacatccccaccagacaccagcgcctctgcccaatccaggcctctatccc
ccaccagtatccatgtctccagggcagccaccacctcagcagttgcttgctcctacttac
ttttctgctccaggcgtcatgaactttggtaaccccagttacccttatgctccaggggca
ttgcctcccccaccacctcctcatctgtatcctaacacacaggccccatcgcaggtatat
ggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctccccaccc
cggaggactccccagccagtcaccatcaagcccccaccgcctgaggttgtaagcaggggt
tccagctaa
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