KEGG   Ovis aries (sheep): 101107033
Entry
101107033         CDS       T03117                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X2
  KO
K14323  protein CASC3
Organism
oas  Ovis aries (sheep)
Pathway
oas03013  Nucleocytoplasmic transport
oas03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oas00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101107033 (CASC3)
   03015 mRNA surveillance pathway
    101107033 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oas03019]
    101107033 (CASC3)
Messenger RNA biogenesis [BR:oas03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101107033 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 101107033
NCBI-ProteinID: XP_004012907
LinkDB
Position
11:40183480..40205603
AA seq 802 aa
MAGQGPEPTARPRATLLARGPTAGKSGASPRPLMSPITQFRAPANVLQRASSAPSPSPRK
TGRTAPQVKHAGTGSQASRQPLRRAGYVRIWPAAAVLRKMADRRRQRASQDTEDEESGAS
GSDSGGSPARGGGSCSGSVEGGGSGSLPSQRGGRAGALHLRRVESGGAKSAEESECESED
GIEGDAVLSDYESAEDSEGDDGEYSEEENSKVELKSEANDAANSSAKDEKGEEKPDTKGT
VTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEE
VRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKP
RFGSPPQRDPNWIGERPSKSHRHQGPGGTLPPRTFINRNAAGTGRMSAPRNYSRSGGFKE
GRTGFRPAEAGGQHAGRSGETVKHETSYRSRHLEQTPVRDPSPEADAQVLGSPEKEEVAP
EIPNPAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAGKVAEEVPPPPEGLTPAPPVPEAT
PPTPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQPAFLQSRELRGMPNHIHMGAG
PPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIMEGHYYDPLQFQGPIYTHG
DSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTY
FSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYGGVTYYNPAQQQVQPKPSPP
RRTPQPVTIKPPPPEVVSRGSS
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggccgggcaaggaccggagccgactgcccgcccaagagcaactctcctcgccaggggc
ccaaccgccgggaagtcaggggcctcaccacgccccctcatgtcaccaattacgcaattc
cgcgcacccgcaaacgtgctgcagcgtgccagctccgcccctagcccctccccccgaaaa
acggggcgaacagcgccgcaagtgaagcatgctgggaccggctctcaagcctcccggcag
cccctgcgacgggcggggtacgtcaggatctggccagcggcggccgttctccgtaagatg
gcggaccggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgcctcc
ggctcagacagcggcggttccccggcgcggggcggcgggagctgcagcggtagcgttgaa
ggcggcggcagcggctctctgccttcccagcgcggaggccgagctggggcccttcatctg
cggcgagtggagagcgggggcgctaagagcgctgaggagtcggagtgtgagagtgaagat
ggcatcgagggcgatgctgttctctcggattatgaaagtgcagaagattcagaaggcgat
gacggggagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaatgat
gctgctaattcttcagcaaaagatgagaagggagaagaaaagcctgacaccaaaggcact
gtgactggagagaggcaaagtggggatggacaggaaagcacagagcctgtggagaacaaa
gtcggtaaaaagggccctaaacatttggatgatgatgaagatcggaagaacccagcatac
ataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggaagaa
gtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcatgac
aagtttcgggaagatgagcaggctccaaagtcccgacaggagctcattgctctttatggc
tatgacatccgctcagctcacaatcctgatgatatcaaaccccgaagaatccggaaacct
aggtttgggagtcctccacaaagagatccaaactggattggtgagcggccaagtaagtct
caccgccaccagggtcctgggggcaccctaccacccaggacatttatcaacaggaatgct
gcaggtactggccgcatgtcggctcccaggaattactctcgatctggaggcttcaaggaa
ggtcgtactggttttaggcctgcagaagctggtggacagcatgctggccggtctggtgag
actgttaaacatgagactagttaccggtctcggcacttggagcagactcctgtaagggat
ccatctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggtagcccct
gagataccaaatcctgctcctgatactgcaccaccagctcctgacaggcctgttgaaaag
aaatcctattcccgggcaagaagaaccagaatcaaagctggagatgcaggcaaggttgca
gaggaggtgccccctccacccgaagggctgaccccagcacctccagttccagaagctaca
cctcctacgcctgctaagactggaaactgggaggctccagtggattctactacagggggt
cttgaacaagatgtggcacaactaaatataacagaacaaaattggagtccagggcagcct
gccttcctgcagtcacgggagcttcggggtatgcccaaccatatacacatgggagcagga
cctccacctcagttcaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgc
tattcatcacaacggcaaagacctgtgccagagccccctgcccctcctgtgcatatcagc
atcatggaaggacattactatgatccattgcagttccagggaccaatctatacccatggt
gacagccctgccccactgcctcctcagggcatgattgtacagccagaaatgcaccttccc
cacccaggtttacatccccaccagacaccagcgcctctgcccaatccaggcctctatccc
ccaccagtatccatgtctccagggcagccaccacctcagcagttgcttgctcctacttac
ttttctgctccaggcgtcatgaactttggtaaccccagttacccttatgctccaggggca
ttgcctcccccaccacctcctcatctgtatcctaacacacaggccccatcgcaggtatat
ggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctccccaccc
cggaggactccccagccagtcaccatcaagcccccaccgcctgaggttgtaagcaggggt
tccagctaa

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