Ovis aries (sheep): 101108336
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Entry
101108336 CDS
T03117
Symbol
SMG9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
oas
Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101108336 (SMG9)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101108336 (SMG9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
AAA_30
DUF6079
Motif
Other DBs
NCBI-GeneID:
101108336
NCBI-ProteinID:
XP_027834227
EnsemblRapid:
ENSOARG00020003705
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All DBs
Position
14:complement(51747279..51767349)
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AA seq
520 aa
AA seq
DB search
MSESGHSQPGLYGMERRRRWKEPGPGGPQNLSGPGGRERDYIAPWERERRDGSEETSTAV
MQKTPIILSKPPAERSKQPPPPAAPAAPPAPAPLEKPIVLMKPREEGKGPAATTSASTPE
GTAPPPPAAPVPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG
AEYYPHLVFLQNKARREDFCPRKLRQMHLVIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDSEVNLFLMPFMDSETESETPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctgggcacagtcagccagggctctatgggatggagaggcggcggcgctgg
aaggagccaggccctggcggccctcagaatctctccgggcccggaggtcgggagagggac
tacatcgcaccctgggaaagagagagacgggatggcagcgaagagactagcacggcggtc
atgcagaaaacccccatcatcctctcaaagcctccagcagagcggtcaaagcagcccccg
cctccagcagcccctgccgccccacctgctccggcccctctggagaagcccattgtgctc
atgaagccccgggaggaggggaaagggccggcggccacaacgagcgcctcaacccccgag
ggcactgccccaccacccccggcagcccctgtgccacccaagggggagaaggaggggcag
agacccacacagcccgtgtaccagatccagaaccggggcatgggcactgccgctccagca
gccatggaccctgtcgtgggccaggccaaactgctgcccccagagcgcatgaagcacagc
atcaagctggtggacgaccagatgaattggtgcgacagtgccattgagtacctgttggat
cagactgatgtcctggtggttggtgtcctgggcctccaggggacaggcaagtccatggtc
atgtcgttgttgtcagccaacactccggaggaggaccagagggcgtatgttttccgggcc
cagagcgccgaaatgaaggagcgagggggcaaccagaccagtggcatcgacttctttatt
acccaagagcggattgttttcctggacacacagcccatcctgagcccttccatcttggac
catctcatcaacaatgaccgcaagctgcctccagagtacaacctgccccacacctacgtt
gagatgcagtcactccagattgctgccttcctcttcacggtctgccacgtggtgatagtc
gtccaggactggttcacggacctcagtctgtacaggttcctccagacagcagagatggtg
aaaccctccaccccatctcccagccacgagtccagcagctcgtcaggatccgacgaaggc
gctgagtactaccctcacctggtcttcctgcagaataaagctcgccgggaggacttctgt
ccccgcaagctacggcagatgcacctggtgatcgaccagctcatggcccactcccacctg
cggtacaagggtactctatccatgttgcagtgcaatgtcttccccgggctcccgcctgac
ttcctggactctgaggtcaacctgttcctgatgcccttcatggacagtgagacagagagt
gaaaccccacctcgcgcaggacctggttccagccccctcttctccctgctccctgggtac
cgaggccaccccagcttccagtccttggtaagcaagcttcggagccaggtgatgtccatg
gcccggccgcagctgtcacacacgatcctcaccgagaagaattggttccactatgccgcg
cggatctgggacggggtgaagaagtcctccgccctggcagagtacagccgcctgctggcc
tga
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