Ovis aries (sheep): 101109504
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Entry
101109504 CDS
T03117
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
oas
Ovis aries (sheep)
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oas03037
]
101109504 (IFT140)
Cilium and associated proteins [BR:
oas03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
101109504 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
WD40
Beta-prop_HPS5
WDR55
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_WDR75_1st
TPR_GEMI5
WD40_MABP1-WDR62_1st
tRNA_int_end_N2
TPR_12
Motif
Other DBs
NCBI-GeneID:
101109504
NCBI-ProteinID:
XP_042096027
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All DBs
Position
24:complement(1708823..1765933)
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AA seq
1458 aa
AA seq
DB search
MALYFDHRIEAPDTVGSPSHIGWHPIHPFLAVASVSTTSGGSVDMYLEQGECVPDTHVER
SFRVTSLSWHPTRLILAIGWESGEVVMFNKQDKEQHAVPATHTADVAILAWSPNGNCLVS
GDRLGVLLLWRLDQRGRVQGMPLLRHEYGQPLTHCIFLLPPPGEDLVQLARAAVSGDEKA
LDMFNWKKSGFGSILKMGSQEGLSFFVSLTDGTVHHVDEKGRTAQVASTDSSIQTLFYLE
QRGALVAVTDSLLLCLFTVTPEGTAEEVMKVKLSGKTGHRADIALIDGSLLVTAIGETAL
RFWDLERGENYVLSPEEKFGFEKGENINCVSYCKAKGLLAAGTDKGRVAMWRKAPGLPNG
RGAEGKDKWTLQTPTELEGNITQIKWGSRKSLLAVNSISSVLILHEQAMSSHFHQQVAAV
QVSPSLLSVSFLSTGVTHSLRTDMHVTGVFATKDAVAVWNGKQVVIFEPSGATLRSAGSF
LCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLPFSESEGNPCFLDICGTFLVVGTDL
AHFKSFDLSRREAKVHCGCKSLAELVPGVGGLTSLRCNASGSKISLLLSKADNSPDSKIC
FYDVEMDTVTILDLKTGQIDQREALSINGQETKKSQALEDERLTDLVPVSHFWDQSEPRL
FVCEAVREVPGAPSQPADRSTLAEADVLVLSFFVSEEHGFLLQDSFPRPPAFQMLLGIQV
PHYYFMRKPGEANLEDQLDSGSQCIPQAVGRRPLRDFVGLEDCDKPTQDAMLNFSFFLAI
GDMDEAFRSIKLIKSQAVWENMARMCVKTQRLDVARVCLGHMGHARGARALREAQREPEP
EARVAMLAVQLGMLEDAEQLYRRCGRYDLLNRLLQASGQWQRAIEVAERHDRMHLRTTYY
NYARHLEASGDCSLALSYYEKSDTHRFEVPRMLVEDLQALGLYVNKTKDTTLWRWWAQYL
ESQAKMDAALHYYELAQDYFSLVRVHCFQGNIQRAAEIASETGNWAASYHLARQYESQNE
VRQAVHFYTRAQAFNNAIRLCKEHGLDDQLMNLALLSSPEDMLEAARYYEERGEQMDRAV
MLYHKAGHFSKALELAFATQQFAALQLVAEDLDEKSDPALLARCSDFFLEHGQYEKAVEL
LLAAKKYQEALQLCLEQNLTITEEMAEKMTVPKDCKELSEEARRALLEQIASCCMRQGSY
HLATKKYTQAGDRLKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAANYLQSLDWQKDPEV
MKTIISFYTKGRALDLLAGFYDACAQVEVDEYQNYDKAHGALTEAYKCLSKAKARSPLDQ
EARLAQLQSRMTLVKRFMQARSRTYVEDPKESIRQCQLLLEEPHLDSSIRVGDVYGFLVE
RHVHSGDLQTAYRYLEEMRRRLPSTNVSYYVSQHIVDTVHQGLGLPLTCAAPKRTRHNSV
EEHKEADEEVAEEVESGP
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggccctctactttgaccaccgcatagaagccccagacacagttgggtctccctcccac
attggctggcatcccatccacccgttcttggcggtcgcttctgtcagcacaacctcagga
ggcagcgtggacatgtatctggagcaaggcgagtgcgtgccagacacccatgtcgagagg
tcgttccgggtcacctccctgagctggcacccgacgcggctgatcctggctattggctgg
gagtctggggaagtggtcatgtttaacaagcaggacaaggagcagcacgcagtccctgcc
acgcacacggccgacgtcgccatcctcgcctggagccccaacgggaactgcctggtgtcg
ggagacaggctcggcgtcctgctcctgtggaggctggaccagcggggccgcgtgcagggg
atgccactgctgcgccacgagtacgggcagcccctcacccactgcatcttcctgctgccc
ccgcccggcgaggacctggttcagctggccagggcggcagtgagcggggacgagaaggcc
ctggacatgtttaactggaagaagagcggcttcgggagcatcctgaagatggggtctcag
gagggcctctcgttcttcgtcagcctgacagacgggaccgtgcaccacgtggatgagaaa
ggcaggacagcccaggtggcgtccacagacagctccatccagacgctgttctacctggag
cagaggggggcgctggtggcggtgacggacagcctgctgctctgcctgttcacggtgacg
cccgagggcacggccgaggaggtgatgaaggtgaagctgagcgggaagacgggccaccgg
gcagacatcgcgctgatcgatggcagcctgctcgtgaccgccatcggggagacggcgctc
agattctgggatttagaacgaggggagaactacgtcctgagtccagaggagaagtttggt
tttgaaaaaggagagaatataaattgcgtttcttactgtaaagctaaaggtctcctggca
gctggtaccgacaaggggcgagtggccatgtggagaaaagcgccaggcctcccgaacggc
cgcggggcggagggcaaagacaagtggacccttcagactcccactgagctggaaggaaac
atcacacagataaagtggggctccaggaagagcctcctggccgtgaacagcatcagctcc
gtgctcatcctccacgagcaggccatgtcatcccacttccaccagcaggtggccgccgtg
caggtctccccgagcctcctcagcgtgtccttcctgtccacgggggtgacccacagcctg
cgcacagacatgcacgtcaccggagtgtttgccaccaaggatgctgttgccgtctggaat
ggaaaacaggtggtgatctttgagccgtccggagccacgttacgcagtgcagggtccttc
ctgtgtgagtctccagtgttagccatgcatgaagaaaacgtttatacggtggagccgaac
agagtccaagttcgaacctggcaggggaccgtgaagcagctcctgccgttctccgagtca
gaggggaacccgtgcttcttggacatctgtggaactttcctggttgtagggacggacttg
gctcactttaaaagctttgatctttcccgaagagaggccaaggtgcactgcggctgcaag
agcctggccgagctggtcccgggtgtggggggcctgacctcgctcagatgcaatgccagc
ggcagcaagatcagtctcctcctcagcaaggctgacaatagccccgattccaaaatctgc
ttctatgacgtggaaatggacacagtgaccatcctcgacctcaagacgggacagatagat
cagagagaggcattgtccattaatgggcaggagacaaagaagagccaggccctggaggat
gagaggctgacagaccttgtgcccgtgagccacttctgggatcagagcgagccccggctg
ttcgtgtgcgaagccgtgcgcgaggtgcccggtgccccgtcgcagcccgcggacagaagc
acactggccgaggcagacgtgctggtcctgtccttcttcgtctcagaagagcacggcttc
ctgttgcaggacagcttcccccgtccccccgccttccagatgctcctggggatccaggtg
ccccactactacttcatgagaaagccaggagaagctaatctggaggaccagctggactct
gggtcccagtgcatcccccaggcagtgggcaggaggcccctgcgggactttgtggggctg
gaggactgcgacaagcccacacaggacgccatgctcaacttcagctttttcctggccatc
ggggacatggatgaggccttcaggtccatcaagctcatcaagagccaggccgtctgggag
aacatggcgcgcatgtgcgtgaagacgcagcggctggacgtggccagggtgtgcctgggg
cacatgggccatgcccggggggcccgagcgctgcgcgaggcccagcgggagccagagcca
gaggccagggtggccatgctggctgtgcagctgggcatgttggaggacgcggagcagctc
tacaggaggtgtgggcgctacgacctcctcaaccgcctgctgcaggcctcaggccagtgg
cagagggccatcgaggtggccgagcgccacgaccgcatgcacctgcgcaccacctactac
aactacgcccggcacctggaggccagcggggactgcagcctggccctcagctactacgag
aagtcggacacgcaccgcttcgaggtgccgcggatgctggtggaggacctgcaggccctg
gggctgtacgtcaacaagacgaaggacacgacgctgtggcggtggtgggcccagtacctg
gagagccaggccaagatggacgcggcgctgcactactacgagctggcccaggactacttc
tccctggtccgcgtccactgcttccagggcaacatccagcgggccgccgagatagccagc
gagaccgggaactgggcggcctcctaccacctggcccggcagtacgagagccagaatgag
gtgcggcaggccgtgcacttctacacgcgtgcccaggccttcaacaacgccatccgcctg
tgcaaggagcatggcctggacgaccagctcatgaacctggccctgctgagctcccctgag
gacatgctggaggccgcgcgctactacgaggagaggggcgagcagatggaccgggcagtc
atgctgtaccacaaggccgggcacttctccaaggccctggagctggcctttgccacccag
cagtttgcggccctacagctggtggcagaggacctggacgaaaagtcggaccccgccctc
ctggcccgttgctccgacttcttcctggagcacggtcagtacgagaaggctgtggagctg
ctgctggccgccaagaagtatcaggaagccctgcagctgtgcctggagcagaacctgacc
atcaccgaggagatggccgagaagatgacggtgcccaaggactgcaaggagctgtccgag
gaggcccggcgggcgctgctggagcagatcgccagctgctgcatgcgccagggcagctac
cacctggccaccaagaagtacacgcaggcgggggacaggctgaaggccatgagggcgctg
ctcaagtctggggacacggagaagatcgtgttcttcgcgggcgtctcgcggcagaaggag
atctacgtcatggcggctaactacctgcagtccctggactggcagaaggaccccgaggtc
atgaagaccatcatcagcttctacaccaagggccgtgcactggacctgctggccggcttc
tatgacgcctgcgcccaggtggaggtcgacgagtaccagaactacgacaaggcgcacggg
gcgctgactgaggcctacaagtgcctgtccaaggccaaggccaggagcccgctggaccag
gaggccaggctggcacagctgcagagcaggatgacgctggtgaagcgcttcatgcaggcg
cgcagcaggacctacgtggaggaccccaaggagtcgatccggcagtgccagctgctcctg
gaggagccgcacctggacagcagcattcgcgtgggggacgtctacggcttcctggtggag
cgccacgtgcactcgggggacctgcagacggcctacaggtacctggaggagatgcggcgg
cggctgccctccaccaacgtgtcctactacgtgagccagcacatcgtggacaccgtgcac
cagggcctggggctccctctgacatgcgcggcacccaagcgcacgcggcacaacagcgtg
gaggagcacaaggaggcggatgaggaggtggccgaggaggtggagagtgggccctga
DBGET
integrated database retrieval system
