Ovis aries (sheep): 101110083
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Entry
101110083 CDS
T03117
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
oas
Ovis aries (sheep)
Pathway
oas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101110083 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101110083 (EDC4)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101110083 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
101110083 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
101110083
NCBI-ProteinID:
XP_027833904
LinkDB
All DBs
Position
14:34916402..34944176
Genome browser
AA seq
1399 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAENQRPSNAYNGDLNGLLVPDPLCSGDSA
STNKPGLRAMPPINLQEKQVICLLGDDSSTGIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALINGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRTNHSTWPVDVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSPVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLS
AEEENDSLGADGTHGAGAMESSAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPSHP
AHEDFAFGESRPELGSEGLGSAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSTSLQQIAASPSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPALPRPPEELTLSPKLQL
DGGLTMSSSSLQASPRGLLPGLLPGPADKLTPKGPGQVPTAASALALELQEVEPLGLPQA
SPSRTRSPDVISSASTALSQDIPEIASEALSRGFGASAPEGLEPDSMASAASALHLLSPR
PRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSSLA
ESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGNFGTKVPTP
RLPAKDWKTKGSPRASPKLKRKGKKDDGDSSLGSRLTEHQVAETPEDWPALIWQQQRELA
QLRHSQEELLQRLCAQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQEQ
LTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVESSMK
ENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFR
LGTQEYLQQLENHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSGSVRAEVQH
QLHVAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAHLDCQ
AQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSLI
QQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLG
KAARRLSLMLHGLMTPSLP
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcttgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggccggcgggaggccccagtgcagagaaccagcgaccatctaatgcc
tacaatggagatctcaatgggctcctggtcccagaccccctctgctcaggtgacagtgct
tcaacaaacaagcctggtctccgagccatgccacctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccactggcattggaattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcaagcaaggcacgggggagcaacaaggtgaaa
attcagcctgtcgccaagtatgactgggagcagaaatactactatggcaacttgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcaatggtg
cgagtgatcagtgtcagcacttcagagcggaccctgctcaaaggcttcacaggcagcgtg
gctgatctggcctttgcacatctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtatggcgcttggccctgattaatggcaaaattcaagaggagatcttggtc
cacatccgccagccagagggcactccactgaaccacttccggaggatcatctggtgcccc
ttcatccccgaagagagtgaagactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtgtgggacctggacatgctccgcaccaaccacagcacctgg
cccgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacatgc
ttgagtgaaggggccctctcacctgatgggactgtcctggctaccgcaagtcatgatggc
ttcgtcaagttctggcagatctacattgagggacaggatgagccacggtgtttacatgag
tggaagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccccttctggagattcctcattactggcgctgaccagaatcgggag
ctgaagatgtggtgcacagtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagcccagtgagtgtgccccccagcctcaaggtttgcctggacctctcagcagaa
tacctgatcctcagtgatgtacagcggaaggtcctctacgtgatggaactgctgcagaac
caggaggagggccgggcctgcttcagctcaatctctgagttccttctcacccaccctgta
ctgagtttcggcatccaggttgtgagtcgctgccggctgcggcacacagaggtgctgtct
gccgaggaggagaatgacagcctcggggccgacgggacccacggagcaggtgcgatggag
tcttcagccggtgtgctcatcaagctcttttgtgtgcacactaaggcattacaggatgtc
cagatccgctttcagccacagctgaaccctgacgttgtggccccgctcccctcgcaccct
gcccatgaagactttgcatttggagagtctcggccggagctgggctcagagggcctggga
tcggctgctcatggctcccagcctgacctccgacgtatcgtggagttgcctgcaccggct
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acgcctagcacctccctgcagcagatcgctgcatctcccagtagcagcagcagcagcagc
agtagcagcagcagcagttcctctctcacagccgtgtctgctatgagcagtacttcggcc
gtggaccccgccttgcccaggccacctgaggagctgaccttgagccccaagctacagctg
gatggcgggctgaccatgagcagcagcagcctgcaggcaagcccacgtgggctcctgccc
ggcctgctcccaggtccagccgacaaactgactcccaaaggacctggtcaggtgcctact
gctgcctctgcactcgccctggagctgcaagaagtggaacccctggggctgcctcaggct
tcccccagccgcacccgctcccctgatgttatctcctcagcctccactgccttgtcccag
gacatccctgagatcgcgtctgaggcgctgtcccgtggctttggcgcctccgctcctgag
ggcctggagccagacagcatggcctcagcggcctcggcgctccacctgttgtctccacgg
ccccggccagggcccgagctcggcccccagcttagcctggatgggggccctggggatggg
gatcggcatagtaccccttccctcctggaggcagccttgacccaggaggccacagcccct
gacagtcaggtctggcctacagctccagacatcactcgcgagacctgcagcagcctggca
gagagcccccggaatggcctccaggaaaagcacaagagcctggctttccaccgaccacct
tatcacttgctgcagcaacacgacagccaggatgccagcgccgagcaaagtgaccatgat
gatgaggtggccagcctcgcctctgctgcagggaactttggcaccaaagtgcccactcca
cgtcttccagccaaggactggaagaccaagggatcccctcgggcctcacccaagctcaag
agaaagggcaaaaaggatgacggggattcatccttgggatcccggctcacagagcaccag
gtggcagaaacccctgaggactggccggcactgatctggcagcagcagagagagctggca
cagctgcggcacagccaagaagagctgctgcagcgcctgtgcgcccagcttgaaggcctg
cagagcactgtcactggccacgtggagcgagccctggagtcgaggcacgagcaggagcag
cggcgactggagcgggccctggccgaggggcagcagcgaggtgggcagctgcaggagcag
ctgacgcagcagctatcccaggcgctgtcttcagcggtggcagggcggctggagcgcagc
atacgagacgagatcaagaagacggttcctccatgtgtctcccggagtctggagcctgtg
gctggccagctcagcaactcggtggccaccaaactcacagctgtggagagtagcatgaaa
gagaacatctctaagctgctcaagtccaagaacttgacagatgccattgcccgagcagcc
gcagacacattacaggggccaatgcaggctgcctaccgggaagccttccagagcgtggtc
ctgcccgccttcgagaagagctgccaggccatgttccagcagatcaatgacagcttccga
ctgggcacacaggagtacttgcagcagttggagaaccacatgaagagccgcaaggcacga
gagcaggaggcacgggagcctgtgctggcccagctgcggggcctggtcagcaccctgcaa
ggggccacggagcagatggcggccactgtgtctggcagcgttcgggctgaggtgcagcac
cagctgcacgtggccgtaggcagcctgcaggaggcgattctagcacaggtacagcgcatc
gtgaagggcgaagtgagtgtggctctcaaggagcagcaggccgccgtcacctctagcatc
atgcaggccatgcgctcagctgccggcacacctgtccccgctgcccaccttgactgccaa
gcccagcaagcccatatcctgcagctgctacagcagggccacctcaatcaggccttccag
caggccctgacagctgccgacctgaacctggtgctatacgtgtgtgaaacagtggaccca
ggccaggtttttgggcagccaccttgccccctctcccagcctgtactcctttctctcatc
cagcaactggcctctgatcttggcactcgaactgacctcaagctcagctacctggaagag
gctgtaatgcacctggaccacagtgaccccatcactcgggaccacatgggctccgtcatg
gctcaggtgcgccagaagctcttccagttcctgcaggcggagccacacaactcacttggc
aaagcagcccggcgtctcagcctcatgctgcacggccttatgacccccagcctcccttag
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integrated database retrieval system
