Ovis aries (sheep): 101110330
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Entry
101110330 CDS
T03117
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
oas
Ovis aries (sheep)
Pathway
oas04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101110330 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oas04990
]
101110330 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
oas04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
101110330 (SYNPO2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101110330
NCBI-ProteinID:
XP_004009639
EnsemblRapid:
ENSOARG00020011882
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Position
6:complement(6616667..6822373)
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AA seq
1260 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQQQPLQVAKIRSQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLQMLVKRPSSGISETSISESENKNQENVPHEGYVESTTLQI
RPATKSQYREFYMVPVKSGAPLAEEQASGAGLSGSIKEETGLAPHTSDSESGRSPEEIIF
SEKAEAGRPGTVVELQLSLSQERHKGTSAAVVALLGAEKSKSPDPEPNLQHDGIVHINSA
PTIEKEDPPLRSSKTIQISSGQGLRVIQGNEAADTGLPRVEVIFDCSDRQKTEGCRLQAA
KGCVDSPVEGGQSEAPPSLVSFAVSSEGAEQGEDPRSERDHSRPHKHRARHARLRRSESL
SEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELEREAEEE
EEDGDKEDPCEVAFLGASESEVDEELLSDTDDNTHVVNFDWDSGLVDIEKKLNRGDKMEM
LPDTTGKGALMFAKRRERMDQITAQKEEERAGGVPSREPDAAQTAGLRTVTSYQRKEEES
VRVQSSVSKSYIEVSHGLGHVPQQNGFTGVSETAEAQRMIPVNRTAKPFPGSGNQPATPF
SPSRNVTSPIADFPAPPPYSAVTPPPETFSRAVSSPTAGPAPPPPWPQPAPWSQPAFYDS
SERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKKGP
GAGADSGPEEDYLSLGAEACNFMQGSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVWSPG
VAPAQPPAFPASSPSHGTVVSSIKIAQPSYAPTRPASALNLAGPFKGPQAAVASRNYTPK
PAAPTPTVNTAHAGAVGASNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARAHSP
TPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPPAAVKSQPSGPQASKTGKKKGKKPLNALD
VMKHQPYQLNASLFTFQPPDAKDGLPAKPSVKVSSVPAAKQALPPRPVNPGSPTDVQASS
VYSVPAYTSPPSFFAEATSPVSASPVPLAIPTSPKQESASTSYFVAPRPKFSAKKSGVTV
QQTGRSLSLPGRPVPPAISATSPWLYQPAYSYASKPTDGLEEAKKRLTPWEAAAKSPLGL
VDEAFRPRNIQESIAANVVSAARRKVLPGQSEEWNARLSYVPQTQKSSVGSFAKQEYNVA
SPPNYSMPSSQYGSQALHAYYRQPSRNDSEIMSMETRSDYCLSTTNCNYNPHPRGWRRQT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggattttatctgcatttccatgaccggaggggcgccctgggggttccga
ctgcaaggtggcaaggagcagcagcagcccttacaagtcgctaagatcagaagccagagc
aaagcctccgggtctgggctctgtgagggggatgaagtggtttctatcaatggcaaccct
tgtgcagacctcacctacccagaagtcatcaagctcatggagagcataacagactctctc
caaatgctcgtcaaaagaccatccagtggaataagtgaaacttcgatctctgaaagtgaa
aacaaaaaccaggagaatgtcccccatgaagggtacgtggaaagtaccaccctacagatt
cgaccagccacaaagagccagtacagagagttctacatggtccctgtcaagagtggagct
cccctagctgaggagcaagcgagtggtgctggtttgtctgggagcataaaagaagaaaca
ggcctggcccctcacacgtctgactctgaaagtggacgctcaccagaggagattatcttc
agtgagaaggcagaagcggggcggccaggcactgtggttgagctgcaactgtccctgtca
caagagagacacaagggcacgagcgccgccgtagtggctctcctgggagcagaaaaatct
aagtctcctgacccagagcctaatttacagcatgacgggattgtccacataaattctgcc
cccactatcgagaaggaggaccctcctctgaggtccagcaagacaatccagatctccagt
ggccaggggctgagagtgatccagggaaatgaagcggcagacacggggctgccccgcgtg
gaagtgatcttcgactgctctgacaggcagaagacggaagggtgcaggcttcaggcagca
aaggggtgtgtggattctccagtggaaggagggcagtcagaagcacctccttctctggta
tcctttgcagtctcatcagaaggcgcagagcagggagaagatccacgctcagaaagggat
cacagcagacctcacaagcacagagcgcgccacgcacggctcaggaggagtgaaagctta
tcagaaaagcaggtgaaagaagcaaaatctaaatgcaaaagcattgccctccttctgaca
gatgcccccaaccccaactccaagggggtgttgatgtttaagaagcgtcgtcggagggcc
aggaaatacacgctcgtcagctacgggactggtgaacttgagcgagaggcagaggaggag
gaggaagacggcgacaaagaggatccatgtgaagtagcgtttctgggtgcaagcgaatcg
gaggtggatgaagaattgctgtctgacactgacgacaacacacacgttgtgaactttgac
tgggattctggtctagtggacattgaaaagaaactgaacagaggggacaagatggagatg
ctgccagacaccacaggcaagggggccctcatgtttgccaagaggagggagagaatggac
cagatcacagcccaaaaagaggaggagagggcgggtggagtgccaagcagagagccagac
gctgcccagacagcaggcctgagaaccgtgacgtcttaccaaaggaaggaggaagagtcg
gtgagagtgcagagctctgtgagcaaaagctacattgaggtgagccacggtctcggccat
gtgccccaacagaacggcttcactggggtgtctgagacagcagaagctcagaggatgatc
cctgtgaatagaacagccaagcccttcccggggtctgggaaccagccggcaacccccttc
tctccaagccgaaacgtgacaagtcccatcgctgactttcctgcgcctccaccttactct
gcagtcacacccccacctgaaaccttctccagagcagtgtcgagtccaacagctggccca
gcaccgccccctccgtggccccagcctgccccatggtcccagccggccttttacgattca
tctgaacgaatagcttcccgggatgaaaggattgcggtgccagcaaaaagaacggggata
ttgcaagaggccaaaaggagaagcacgacaaaacccatgttcacttttaaagagcccaaa
gtcagccccaatcctgaactcttgtcacttcttcaaaattctgagggtaaaaagggccct
ggagcgggagcagattccggacctgaagaagactacctcagtttaggagcagaggcttgt
aacttcatgcaaggctcctctgcaaaacagaagaccccgcctcctgtcgctccaaagcct
gctgtcaagtcctcatcctcccaaccagtcactccggtttctccagtctggtcgccagga
gtggctccagcgcaacctcctgccttccccgcatccagcccgtcacatggcaccgtggtc
tcctccatcaaaatcgcgcagccttcttacgctcccacccggcctgcaagtgctctgaac
ctggctggtcctttcaaaggcccacaggcagcggtagccagccggaactatactcccaaa
ccagcagctcccacaccgacagtgaacactgctcatgctggtgcggtgggagcatccaat
gagcttccaggaatgagtgggaagggagcccagctctttgctaagaggcagtcaaggatg
gagaagtacgtggtagattcggacaccgtgcaggcccacgctgcccgggctcattctccc
accccgtctctccctgccggttggaagtactcctccaatgtccgagcgcctccgcctgtg
gcctacaatcctatccactccccctcctacccaccggctgctgtcaagtctcagccatca
ggcccacaggcctccaagacaggcaagaaaaagggcaagaaacccctcaatgctttggat
gtcatgaagcaccaaccctatcagcttaatgcgtccttgtttactttccaacctccagat
gcgaaggacggcctccccgcaaagccatcggttaaggtcagttcagtgccagctgccaag
caagctcttcctcctcggccagtgaaccctggctcgcccactgatgtgcaggcctcctct
gtgtactccgtgccagcctatacctctccaccttccttctttgctgaggccacctcaccg
gtcagcgcttccccagtgcccctggccatccccacctctccaaagcaggaatcagcctca
acatcctactttgtggcaccaaggccaaagttctcagcaaagaagagcggtgtcacagtt
cagcagactggacgctctctttctcttcctggaagaccagtcccacctgccatctctgca
acatctccttggttataccagcctgcgtacagctacgctagcaaaccaactgacgggctc
gaggaagcaaagaaaagactgactccttgggaagcagctgccaagtctccccttggctta
gtggatgaggccttcagacccagaaacattcaggaatccattgcggcaaatgtggtctca
gcagctcgtagaaaggtgcttccagggcagtctgaggaatggaatgcaagactgtcctat
gtccctcaaacccagaagagcagtgtgggctcatttgcaaagcaagaatataatgttgca
tccccacccaattatagtatgcccagctcccagtatggttcacaggcactacatgcatat
tacaggcagccttccagaaacgattctgaaataatgtccatggagaccaggtctgattat
tgtctctccacaaccaactgcaactataacccacacccgaggggatggagacgtcaaaca
tga
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