Ovis aries (sheep): 101110622
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Entry
101110622 CDS
T03117
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X2
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
oas
Ovis aries (sheep)
Pathway
oas03082
ATP-dependent chromatin remodeling
oas03250
Viral life cycle - HIV-1
oas04714
Thermogenesis
oas05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101110622 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101110622 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101110622 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101110622 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oas01009
]
101110622 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oas03021
]
101110622 (SMARCB1)
03036 Chromosome and associated proteins [BR:
oas03036
]
101110622 (SMARCB1)
Protein phosphatases and associated proteins [BR:
oas01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101110622 (SMARCB1)
Transcription machinery [BR:
oas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101110622 (SMARCB1)
SWI/SNF complex
101110622 (SMARCB1)
Chromosome and associated proteins [BR:
oas03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101110622 (SMARCB1)
PBAF complex
101110622 (SMARCB1)
SWI/SNF complex
101110622 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
101110622
NCBI-ProteinID:
XP_004017712
UniProt:
W5PUS4
LinkDB
All DBs
Position
17:71288769..71305020
Genome browser
AA seq
376 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNS
QWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPI
RLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYP
TDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVT
TIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQD
RNTRRMRRLANTAPAW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtcaagttccagctggaa
gacgacggcgagttctacatgatcggctctgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcgctctggaggcgactagccactgtggaagagagg
aagaaaatagttgcttcgtcacatgatcatggatacacgaccctggccaccagcgtgacc
ctgctgaaagcctccgaggtggaggagatcctggacggcaacgacgagaagtacaaggcc
gtgtccatcagcaccgagccccccacctacctcagggaacagaaggccaagaggaacagc
cagtgggtacccaccctgcccaacagctcgcaccacctagatgccgtgccctgctccacc
accatcaacaggaaccgcatgggccgcgacaagaagcggaccttcccactctgcttcgac
gaccacgacccagctgtgatccacgagaatgcgtcccagcccgaggtgctggtccccatc
cgattggacatggagattgacgggcagaagctgcgggacgcctttacctggaacatgaat
gagaagctgatgaccccggagatgttctcagagattctctgtgacgacctggatctgaac
ccactgacattcgtgccggccattgcctccgccatcagacagcagatcgagtcctacccc
acggacagcatcctggaagaccagtcagaccagcgcgtcattatcaagctgaacatccat
gtggggaacatctccctggtggaccagttcgagtgggacatgtcggagaaggagaactcg
cccgagaagttcgccctgaagctgtgctccgagctggggctgggcggggagttcgtcacc
accatcgcctacagcatccggggacagctgagctggcatcagaagacctacgccttcagc
gagaaccccctgcccacggtggagattgccatccggaacacgggggacgctgaccagtgg
tgcccgctgctggagaccctgacggacgccgagatggagaagaagatccgagaccaggac
cggaacacgaggcggatgaggcgtctggccaacacagccccggcctggtga
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integrated database retrieval system
