Ovis aries (sheep): 101111790
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Entry
101111790 CDS
T03117
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
oas
Ovis aries (sheep)
Pathway
oas04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101111790 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oas04121
]
101111790 (TRIM54)
Ubiquitin system [BR:
oas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101111790 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
PHP
Sina_RING
Mod_r
DUF349
DUF1421
FlgN
Zn_ribbon_FGT1_2
COG2_C
MIF4G_like_2
UvrD_C
DUF5799
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101111790
NCBI-ProteinID:
XP_027822417
LinkDB
All DBs
Position
3:34361236..34382708
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AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRSSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEENSRRQKQLLNQRFEGLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYERMDQFTLSVEHVAEMLRTIDFQPGTSGEEEDEEVAVEGEEGNAGAEEERTDGR
ESTGQH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacggtgggtttcaagccgctgctaggggatgcgcacagcatggacaacctg
gagaagcagcttatttgccccatctgcctggagatgttctccaaaccggtggtgatcctc
ccctgccagcacaacctgtgtcgcaagtgcgccaacgacgtcttccaggcctcaaaccct
ctgtggcagtcccgaagctccaccactgtgtcttcggggggccgtttccgctgcccatct
tgcaggcacgaggtggtcctggaccgacatggtgtctacggcctgcagcggaacctgctc
gtggagaatattatcgacatttacaagcaggagtcctcccggccactgcattccaaggct
gagcagcacctcatgtgtgaggagcatgaagacgagaagatcaacatttactgtctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgccagaagagtgagctcagcgatggcatcgcgatg
ctggtggccggcaatgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accatcgaggaaaacagccggaggcagaagcagttgctgaaccagaggtttgagggcctg
tgtgcagtgctggaggagcggaagggtgagctgctgcaggcgctggcccgggagcaggag
gagaagctgcagcgagtcaggggcctcatccgccagtacggagaccacctggaggcctcc
tctaagctggtggagtctgccatccagtccatggaggagccgcagatggcactctacctg
cagcaggccaaggagttgatcaataaggtcgggacgatgtcgaaggtggagctggccggc
cggccggagccgggctatgaaagaatggatcaattcaccctgagcgtggagcatgtggcg
gaaatgctgaggaccattgacttccagccaggcacttctggagaggaagaggatgaggag
gtcgcggtagaaggggaagagggcaacgcaggagcagaggaagagcggacggatgggcgg
gaaagcacaggccagcactga
DBGET
integrated database retrieval system
